RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SARSP49591 514 aaKnown RBP5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 NKX3-2P78367 333 aa5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 TUSC3Q13454 348 aa5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 HABP4Q5JVS0 413 aaKnown RBP5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 MTDHQ86UE4 582 aaKnown RBP5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 ZNF761Q86XN6 746 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 SREK1Q8WXA9 508 aaKnown RBP5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 CD244Q9BZW8 370 aa5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 RTEL1Q9NZ71 1219 aa5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 PCDHA8Q9Y5H6 950 aa5.29□□□□□ -1.56
HMGB1P29-201ENST00000505659 TCRBV5S4A2TA0A5A2 114 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 PRICKLE3O43900 615 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 SMARCA5O60264 1052 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 BMS1Q14692 1282 aaKnown RBP5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 NFIXQ14938 502 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 PRR31Q5SQ13 230 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 PROSER1Q86XN7 944 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 UHMK1Q8TAS1 419 aaKnown RBP5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 PHOSPHO1Q8TCT1 267 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 ADAMTS17Q8TE56 1095 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 SH3RF2Q8TEC5 729 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 PTPRN2Q92932 1015 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 KISS1RQ969F8 398 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 ALG1Q9BT22 464 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 DHRS4Q9BTZ2 278 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 PCDHA9Q9Y5H5 950 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 DUSP10Q9Y6W6 482 aa5.28□□□□□ -1.56
HMGB1P29-201ENST00000505659 FAM47E-STBD1D6RA91 191 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 DDX3XO00571 662 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 NOBOXO60393 691 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 SRGAP2CP0DJJ0 459 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 RPL13P26373 211 aaKnown RBP5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 GUCY1A3Q02108 690 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 SPIRE1Q08AE8 756 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 CYP4F22Q6NT55 531 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 TTLL7Q6ZT98 887 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 MAMDC2Q7Z304 686 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 LRP10Q7Z4F1 713 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 FERMT3Q86UX7 667 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 LILRB2Q8N423 598 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 PCDH19Q8TAB3 1148 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 DDX1Q92499 740 aaKnown RBP5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 RELTQ969Z4 430 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 OSBPL2Q9H1P3 480 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 SLC52A2Q9HAB3 445 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 USP40Q9NVE5 1235 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 NDOR1Q9UHB4 597 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 DSEQ9UL01 958 aa5.27□□□□□ -1.57
HMGB1P29-201ENST00000505659 AQP7O14520 342 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 KCNK3O14649 394 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 FOXD2O60548 495 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 MAFKO60675 156 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 RASGRP1O95267 797 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 CRTAMO95727 393 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 PYGMP11217 842 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 MLLT6P55198 1093 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 PAK1Q13153 545 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 PAN2Q504Q3 1202 aaKnown RBP5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 MCTP2Q6DN12 878 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 TTLL6Q8N841 843 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 TTLL11Q8NHH1 800 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 IPO9Q96P70 1041 aaKnown RBP5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 PCDH18Q9HCL0 1135 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 CROTQ9UKG9 612 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 CBLCQ9ULV8 474 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 PTCH2Q9Y6C5 1203 aa5.26□□□□□ -1.57
HMGB1P29-201ENST00000505659 ACOT7O00154 380 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 ARVCFO00192 962 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 AMY2AP04746 511 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 ZNF28P17035 718 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 AMY2BP19961 511 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 GJA9P57773 515 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 GABREP78334 506 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 RGL3Q3MIN7 710 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 KCTD1Q719H9 257 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 DPH6Q7L8W6 267 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 FRMD5Q7Z6J6 570 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 PTRH1Q86Y79 214 aaKnown RBP5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 SLC7A14Q8TBB6 771 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 ZCCHC14Q8WYQ9 949 aaKnown RBP5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 MKL1Q969V6 931 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 TEPSINQ96N21 525 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 LNPKQ9C0E8 428 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 KANSL2Q9H9L4 492 aa5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 NGRNQ9NPE2 291 aaKnown RBP5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 CDK11AQ9UQ88 783 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P29-201ENST00000505659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 B8ZZF3 427 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 PDE6AP16499 860 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 FAHP16930 419 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 KRT15P19012 456 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 CNR2P34972 360 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 BUD31P41223 144 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 LONRF2Q1L5Z9 754 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 C2orf27AQ580R0 203 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 SOGA3Q5TF21 947 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 PRAMEF18Q5VWM3 479 aa5.24□□□□□ -1.57
HMGB1P29-201ENST00000505659 FSTL4Q6MZW2 842 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms