RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 FGFR1P11362 822 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PABPC1P11940 636 aaKnown RBP5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SLC6A11P48066 632 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 HTRA3P83110 453 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 LSAMPQ13449 338 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 RASGRF1Q13972 1273 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 NTRK3Q16288 839 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MTERF2Q49AM1 385 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 NBPF6Q5VWK0 638 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 B3GNT8Q7Z7M8 397 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 ADGRG2Q8IZP9 1017 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 FNIP1Q8TF40 1166 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 NBPF4Q96M43 638 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PHF20Q9BVI0 1012 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SPATA9Q9BWV2 254 aa5.6□□□□□ -1.51
PDLIM1P4-201ENST00000504327 ADAMTS12P58397 1594 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 ERICH3Q5RHP9 1530 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SYNJ2O15056 1496 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 H7BY64 318 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 FFAR3O14843 346 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 C8BP07358 591 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CACNB2Q08289 660 aaPredicted RBP5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SERINC3Q13530 473 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 VWA3BQ502W6 1294 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 KCNT2Q6UVM3 1135 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 NSMFQ6X4W1 530 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 TTLL10Q6ZVT0 673 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MILR1Q7Z6M3 343 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 FILIP1Q7Z7B0 1213 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MARCH10Q8NA82 808 aaPredicted RBP5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 TP53I13Q8NBR0 393 aaPredicted RBP5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 FBXO41Q8TF61 875 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CPA5Q8WXQ8 436 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 DDX11Q96FC9 970 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 CCDC136Q96JN2 1154 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 NOX5Q96PH1 765 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 KCNC2Q96PR1 638 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SYT3Q9BQG1 590 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 TMX1Q9H3N1 280 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 ZCCHC4Q9H5U6 513 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 PCDH12Q9NPG4 1184 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 GPR27Q9NS67 375 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 SIRPGQ9P1W8 387 aa5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 MRPL42Q9Y6G3 142 aaKnown RBP5.59□□□□□ -1.51
PDLIM1P4-201ENST00000504327 KIF27Q86VH2 1401 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 A0A1B0GTL3 188 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 PPP1R12AO14974 1030 aaPredicted RBP5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 ADCY3O60266 1144 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 DIAPH1O60610 1272 aaKnown RBP5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 DNAJC6O75061 913 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 IRX6P78412 446 aaPredicted RBP5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 SSRP1Q08945 709 aaKnown RBP5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 IFRD2Q12894 506 aaPredicted RBP5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 RASA3Q14644 834 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 ETV3LQ6ZN32 361 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 MIB1Q86YT6 1006 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 FAM26EQ8N5C1 309 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 LINC01356Q8N9X3 169 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 ZNF669Q96BR6 464 aaPredicted RBP5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 UBA5Q9GZZ9 404 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 CCDC113Q9H0I3 377 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 SPC25Q9HBM1 224 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 IFT57Q9NWB7 429 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 RUSC2Q8N2Y8 1516 aa5.58□□□□□ -1.52
PDLIM1P4-201ENST00000504327 FHAD1B1AJZ9 1412 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 S100BP04271 92 aaPredicted RBP5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 CYP2C8P10632 490 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 STAT5AP42229 794 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 SETQ01105 290 aaPredicted RBP5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 RALBP1Q15311 655 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 PLEKHG6Q3KR16 790 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 FOXB2Q5VYV0 432 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 STEAP3Q658P3 488 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 SYT8Q8NBV8 401 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 FEZF2Q8TBJ5 459 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 DCAF4Q8WV16 495 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 DEPDC7Q96QD5 511 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 GORASP1Q9BQQ3 440 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 JAM3Q9BX67 310 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 PCGF6Q9BYE7 350 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 CDIP1Q9H305 208 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 EPB41L1Q9H4G0 881 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 PARD6AQ9NPB6 346 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 SNTG2Q9NY99 539 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 ZNF652Q9Y2D9 606 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 CLASP1Q7Z460 1538 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 GRIN2AQ12879 1464 aa5.57□□□□□ -1.52
PDLIM1P4-201ENST00000504327 FAM221BA6H8Z2 402 aa5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 ENPP3O14638 875 aa5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 HGSO14964 777 aaPredicted RBP5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 DGKIO75912 1065 aa5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 HOXA5P20719 270 aa5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 CAP1Q01518 475 aa5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 DLX2Q07687 328 aaPredicted RBP5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 SMAD4Q13485 552 aaKnown RBP5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 EMC4Q5J8M3 183 aa5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 STYK1Q6J9G0 422 aa5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 RSPO2Q6UXX9 243 aaPredicted RBP5.56□□□□□ -1.52
PDLIM1P4-201ENST00000504327 CD300LDQ6UXZ3 194 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms