RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 TMEM132AQ24JP5 1023 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 VPS53Q5VIR6 699 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 SYDE2Q5VT97 1194 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 OTUD7AQ8TE49 926 aaPredicted RBP8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 DHX38Q92620 1227 aaKnown RBP8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 HLA-CQ95604 372 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 CTAGE1Q96RT6 745 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 FSD1Q9BTV5 496 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 SEZ6LQ9BYH1 1024 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 ADD3Q9UEY8 706 aaKnown RBP8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 NOD1Q9Y239 953 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 C5orf42Q9H799 3197 aa8.18□□□□□ -1.1
CHCHD3-206ENST00000496427 BAZ2BQ9UIF8 2168 aaKnown RBP8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 ZNF318Q5VUA4 2279 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 FAM181BA6NEQ2 426 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 KIF28PB7ZC32 967 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 SLC3A2P08195 630 aaKnown RBP8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 IL9P15248 144 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 RFC2P35250 354 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 KCNJ6P48051 423 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 PDE4DQ08499 809 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 GPNMBQ14956 572 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 PTGISQ16647 500 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 RRP12Q5JTH9 1297 aaKnown RBP8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 ZMYM1Q5SVZ6 1142 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 GDF6Q6KF10 455 aaPredicted RBP8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 FAM117BQ6P1L5 589 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 RETREG2Q8NC44 543 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 PI4K2BQ8TCG2 481 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 DCAF4Q8WV16 495 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 CLEC4DQ8WXI8 215 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 GPATCH3Q96I76 525 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 NACAP1Q9BZK3 213 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 TOMM22Q9NS69 142 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 KMT2EQ8IZD2 1858 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 PLXNA4Q9HCM2 1894 aa8.17□□□□□ -1.1
CHCHD3-206ENST00000496427 BAIAP3O94812 1187 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 MMP3P08254 477 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 TXNP10599 105 aaKnown RBP8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 RPS6P62753 249 aaKnown RBP8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 BFSP2Q13515 415 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 USH1GQ495M9 461 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 SMYD5Q6GMV2 418 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 NFRKBQ6P4R8 1299 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 RNF207Q6ZRF8 634 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 LRRC8DQ7L1W4 858 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 CHST3Q7LGC8 479 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 ALYREFQ86V81 257 aaKnown RBP8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 PHOSPHO2Q8TCD6 241 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 RAD50Q92878 1312 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 WNT8BQ93098 351 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 TMEM47Q9BQJ4 181 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 CPVLQ9H3G5 476 aa8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 UBE2ZQ9H832 354 aaPredicted RBP8.16□□□□□ -1.1
CHCHD3-206ENST00000496427 LINC01553A4QN01 128 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 A6NJR5 290 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 NKRFO15226 690 aaKnown RBP eCLIP8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 SORBS3O60504 671 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 GPR37L1O60883 481 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 NBNO60934 754 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 EDNRBP24530 442 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 LY6KQ17RY6 165 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 BRDTQ58F21 947 aaPredicted RBP8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 CNKSR3Q6P9H4 555 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 BTNL9Q6UXG8 535 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 AFAP1L1Q8TED9 768 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 SCFD2Q8WU76 684 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 AFG1LQ8WV93 481 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 TBC1D5Q92609 795 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 KAT2BQ92831 832 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 ALG1Q9BT22 464 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 SUGCTQ9HAC7 445 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 PRDM9Q9NQV7 894 aa8.15□□□□□ -1.1
CHCHD3-206ENST00000496427 WDFY4Q6ZS81 3184 aa8.15□□□□□ -1.11
CHCHD3-206ENST00000496427 TTC41PQ6P2S7 1318 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 PI4K2BG5E9Z4 385 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 ORC4O43929 436 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 ZNF286BP0CG31 522 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 GOLGA8HP0CJ92 632 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 PDHBP11177 359 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 CKBP12277 381 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 SELPP16109 830 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 KCNA5P22460 613 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 NOVP48745 357 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 MMP16P51512 607 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 HAND2P61296 217 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 ZNF200P98182 395 aaPredicted RBP8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 PTPN11Q06124 597 aaPredicted RBP8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 ARHGAP1Q07960 439 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 MBTPS1Q14703 1052 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.14□□□□□ -1.112e-8■■■■■ 44.9
CHCHD3-206ENST00000496427 SEPT14Q6ZU15 432 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 CCDC155Q8N6L0 562 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 CAGE1Q8TC20 777 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 TGS1Q96RS0 853 aaKnown RBP8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 C17orf80Q9BSJ5 609 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 DCTPP1Q9H773 170 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 COL20A1Q9P218 1284 aa8.14□□□□□ -1.11
CHCHD3-206ENST00000496427 HDAC6Q9UBN7 1215 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms