RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 USP17L6PQ6QN14 398 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 DNAAF5Q86Y56 855 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 TBC1D5Q92609 795 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 NOX5Q96PH1 765 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 MXD3Q9BW11 206 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 PACSIN1Q9BY11 444 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 RIC8AQ9NPQ8 531 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 GAKO14976 1311 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 ABCB11O95342 1321 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 POTEB3A0JP26 581 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 POTECB2RU33 542 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 RAD21O60216 631 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 PALMO75781 387 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 GLI1P08151 1106 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 KLRC1P26715 233 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 GABPAQ06546 454 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 POTEBQ6S5H4 581 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 C15orf52Q6ZUT6 534 aaKnown RBP14.37□□□□□ -0.11
PTPN7-217ENST00000495688 FAM76AQ8TAV0 307 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 POLD4Q9HCU8 107 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 PNMA6FA0A0J9YX94 578 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 C6orf229H3BNL8 230 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 RIMBP2O15034 1052 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 STAT3P40763 770 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 CLK2P49760 499 aaKnown RBP14.37□□□□□ -0.11
PTPN7-217ENST00000495688 ITIH3Q06033 890 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 SLC9C1Q4G0N8 1177 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 PPP4R3AQ6IN85 833 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 C8orf74Q6P047 294 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 TBC1D16Q8TBP0 767 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 ARL8AQ96BM9 186 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 FAM163AQ96GL9 167 aaPredicted RBP14.37□□□□□ -0.11
PTPN7-217ENST00000495688 ZHX3Q9H4I2 956 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 ADAMTS1Q9UHI8 967 aa14.37□□□□□ -0.11
PTPN7-217ENST00000495688 A0A087X0T9 212 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 SSU72P8A0A1W2PR75 194 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 FAM228BP0C875 321 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 PAFAH1B1P43034 410 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 PSMD2Q13200 908 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 TRADDQ15628 312 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 SHROOM1Q2M3G4 852 aaPredicted RBP14.36□□□□□ -0.11
PTPN7-217ENST00000495688 SFMBT2Q5VUG0 894 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 FAM133AQ8N9E0 248 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 NGLY1Q96IV0 654 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTPN7-217ENST00000495688 CEP72Q9P209 647 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 hCG_1984214I3L0E3 225 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 PPFIA4O75335 1185 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 FAM153BP0C7A2 387 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 CARSP49589 748 aaKnown RBP14.36□□□□□ -0.11
PTPN7-217ENST00000495688 RAPGEF1Q13905 1077 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 PTPROQ16827 1216 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 FAM153CQ494X1 144 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 HERC4Q5GLZ8 1057 aaPredicted RBP14.36□□□□□ -0.11
PTPN7-217ENST00000495688 PROM2Q8N271 834 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 ZNF713Q8N859 430 aaPredicted RBP14.36□□□□□ -0.11
PTPN7-217ENST00000495688 SCFD1Q8WVM8 642 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 GOLPH3Q9H4A6 298 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 FAM153AQ9UHL3 310 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 PCDHA2Q9Y5H9 948 aa14.36□□□□□ -0.11
PTPN7-217ENST00000495688 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTPN7-217ENST00000495688 IGKV6D-41A0A0C4DH26 115 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 MPHOSPH10O00566 681 aaKnown RBP14.35□□□□□ -0.11
PTPN7-217ENST00000495688 TTLL1O95922 423 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 ATP2B4P23634 1241 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 CERS3Q8IU89 383 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 TRIM59Q8IWR1 403 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 CUL5Q93034 780 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 TSPYL1Q9H0U9 437 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 NFU1Q9UMS0 254 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 NHSQ6T4R5 1651 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 KRT14P02533 472 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 SERPING1P05155 500 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 PLA2G4BP0C869 781 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 ACTN1P12814 892 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 IRAK1P51617 712 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 CASP5P51878 434 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 KIAA0753Q2KHM9 967 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 GPBP1Q86WP2 473 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 ATP6V0A2Q9Y487 856 aa14.35□□□□□ -0.11
PTPN7-217ENST00000495688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.34□□□□□ -0.11
PTPN7-217ENST00000495688 SCNN1DP51172 638 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 EPHB4P54760 987 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 SLC20A2Q08357 652 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 CFAP221Q4G0U5 840 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 TTMPQ5BVD1 217 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 KCTD16Q68DU8 428 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 IFT81Q8WYA0 676 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 KCTD10Q9H3F6 313 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 PLIN4Q96Q06 1357 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 POTEFA5A3E0 1075 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 FAM196BA6NMK8 535 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 SHOX2O60902 331 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-217ENST00000495688 POTEIP0CG38 1075 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 ADAM9Q13443 819 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 CRY2Q49AN0 593 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 ARSHQ5FYA8 562 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms