RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 LZTS2Q9BRK4 669 aa26.82■■□□□ 1.88
COL27A1-208ENST00000494780 USP26Q9BXU7 913 aa26.82■■□□□ 1.88
COL27A1-208ENST00000494780 BCAS3Q9H6U6 928 aa26.82■■□□□ 1.88
COL27A1-208ENST00000494780 RSPH10B2B2RC85 870 aa26.81■■□□□ 1.88
COL27A1-208ENST00000494780 RSPH10BP0C881 870 aa26.81■■□□□ 1.88
COL27A1-208ENST00000494780 THPOP40225 353 aa26.81■■□□□ 1.88
COL27A1-208ENST00000494780 KRT40Q6A162 431 aa26.81■■□□□ 1.88
COL27A1-208ENST00000494780 XRRA1Q6P2D8 792 aa26.81■■□□□ 1.88
COL27A1-208ENST00000494780 SMARCC2Q8TAQ2 1214 aa26.81■■□□□ 1.88
COL27A1-208ENST00000494780 CUL5Q93034 780 aa26.81■■□□□ 1.88
COL27A1-208ENST00000494780 ATP6V0A1Q93050 837 aa26.81■■□□□ 1.88
COL27A1-208ENST00000494780 COG5Q9UP83 839 aa26.81■■□□□ 1.88
COL27A1-208ENST00000494780 TRANK1O15050 2925 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 PIK3CDO00329 1044 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 LPXNO60711 386 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 SMIM10L2AP0DMW4 78 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 SMIM10L2BP0DMW5 78 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 BMP1P13497 986 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 GNAQP50148 359 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 TFF2Q03403 129 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 SEMA3FQ13275 785 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 CYFIP1Q7L576 1253 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 SPRED2Q7Z698 418 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 TMTC2Q8N394 836 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 MYL10Q9BUA6 226 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 RTEL1Q9NZ71 1219 aa26.8■■□□□ 1.88
COL27A1-208ENST00000494780 SEC63Q9UGP8 760 aaKnown RBP26.8■■□□□ 1.88
COL27A1-208ENST00000494780 PRC1O43663 620 aa26.79■■□□□ 1.88
COL27A1-208ENST00000494780 IRX6P78412 446 aaPredicted RBP26.79■■□□□ 1.88
COL27A1-208ENST00000494780 PCNX4Q63HM2 1172 aa26.79■■□□□ 1.88
COL27A1-208ENST00000494780 USP17L6PQ6QN14 398 aa26.79■■□□□ 1.88
COL27A1-208ENST00000494780 GPR20Q99678 358 aa26.79■■□□□ 1.88
COL27A1-208ENST00000494780 RNPEPQ9H4A4 650 aa26.79■■□□□ 1.88
COL27A1-208ENST00000494780 LMCD1Q9NZU5 365 aa26.79■■□□□ 1.88
COL27A1-208ENST00000494780 NCOR1O75376 2440 aa26.79■■□□□ 1.88
COL27A1-208ENST00000494780 CAND2O75155 1236 aa26.78■■□□□ 1.88
COL27A1-208ENST00000494780 MCM5P33992 734 aa26.78■■□□□ 1.88
COL27A1-208ENST00000494780 DBF4BQ8NFT6 615 aa26.78■■□□□ 1.88
COL27A1-208ENST00000494780 TMEM87BQ96K49 555 aa26.78■■□□□ 1.88
COL27A1-208ENST00000494780 TGS1Q96RS0 853 aaKnown RBP26.78■■□□□ 1.88
COL27A1-208ENST00000494780 SENP7Q9BQF6 1050 aa26.78■■□□□ 1.88
COL27A1-208ENST00000494780 MEIS2O14770 477 aa26.77■■□□□ 1.88
COL27A1-208ENST00000494780 TREHO43280 583 aa26.77■■□□□ 1.88
COL27A1-208ENST00000494780 GNAT1P11488 350 aa26.77■■□□□ 1.88
COL27A1-208ENST00000494780 ERVK-21P61565 698 aa26.77■■□□□ 1.88
COL27A1-208ENST00000494780 MKRN4PQ13434 485 aaPredicted RBP26.77■■□□□ 1.88
COL27A1-208ENST00000494780 NFXL1Q6ZNB6 911 aa26.77■■□□□ 1.88
COL27A1-208ENST00000494780 NLRX1Q86UT6 975 aa26.77■■□□□ 1.88
COL27A1-208ENST00000494780 ZNF215Q9UL58 517 aaPredicted RBP26.77■■□□□ 1.88
COL27A1-208ENST00000494780 COL4A4P53420 1690 aaPredicted RBP26.76■■□□□ 1.87
COL27A1-208ENST00000494780 LINC01553A4QN01 128 aa26.76■■□□□ 1.87
COL27A1-208ENST00000494780 CCDC69A6NI79 296 aa26.76■■□□□ 1.87
COL27A1-208ENST00000494780 SH2B2O14492 632 aaPredicted RBP26.76■■□□□ 1.87
COL27A1-208ENST00000494780 AMHP03971 560 aa26.76■■□□□ 1.87
COL27A1-208ENST00000494780 PLEKHG4Q58EX7 1191 aa26.76■■□□□ 1.87
COL27A1-208ENST00000494780 FAM117BQ6P1L5 589 aa26.76■■□□□ 1.87
COL27A1-208ENST00000494780 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.76■■□□□ 1.87
COL27A1-208ENST00000494780 LSG1Q9H089 658 aaKnown RBP26.76■■□□□ 1.87
COL27A1-208ENST00000494780 PLEKHA8P1O95397 391 aa26.75■■□□□ 1.87
COL27A1-208ENST00000494780 CALM1P0DP23 149 aa26.75■■□□□ 1.87
COL27A1-208ENST00000494780 CALM2P0DP24 149 aa26.75■■□□□ 1.87
COL27A1-208ENST00000494780 CALM3P0DP25 149 aa26.75■■□□□ 1.87
COL27A1-208ENST00000494780 KCNQ1P51787 676 aa26.75■■□□□ 1.87
COL27A1-208ENST00000494780 SRBD1Q8N5C6 995 aaKnown RBP26.75■■□□□ 1.87
COL27A1-208ENST00000494780 GIMAP8Q8ND71 665 aaPredicted RBP26.75■■□□□ 1.87
COL27A1-208ENST00000494780 GDPD5Q8WTR4 605 aa26.75■■□□□ 1.87
COL27A1-208ENST00000494780 HLA-CQ95604 372 aa26.75■■□□□ 1.87
COL27A1-208ENST00000494780 SETD4Q9NVD3 440 aa26.75■■□□□ 1.87
COL27A1-208ENST00000494780 INSL6Q9Y581 213 aa26.75■■□□□ 1.87
COL27A1-208ENST00000494780 LIFRP42702 1097 aa26.74■■□□□ 1.87
COL27A1-208ENST00000494780 SEPT8Q92599 483 aa26.74■■□□□ 1.87
COL27A1-208ENST00000494780 SUGCTQ9HAC7 445 aa26.74■■□□□ 1.87
COL27A1-208ENST00000494780 MTUS1Q9ULD2 1270 aa26.74■■□□□ 1.87
COL27A1-208ENST00000494780 MUC3AQ02505 3323 aa26.73■■□□□ 1.87
COL27A1-208ENST00000494780 SLC27A2O14975 620 aa26.73■■□□□ 1.87
COL27A1-208ENST00000494780 UTP14CQ5TAP6 766 aaKnown RBP26.73■■□□□ 1.87
COL27A1-208ENST00000494780 TRIM50Q86XT4 487 aa26.73■■□□□ 1.87
COL27A1-208ENST00000494780 MYOCDQ8IZQ8 938 aa26.73■■□□□ 1.87
COL27A1-208ENST00000494780 GPRASP2Q96D09 838 aa26.73■■□□□ 1.87
COL27A1-208ENST00000494780 NECAB3Q96P71 396 aaPredicted RBP26.73■■□□□ 1.87
COL27A1-208ENST00000494780 PSTPIP2Q9H939 334 aa26.73■■□□□ 1.87
COL27A1-208ENST00000494780 BDP1A6H8Y1 2624 aa26.72■■□□□ 1.87
COL27A1-208ENST00000494780 TCF20Q9UGU0 1960 aaKnown RBP26.72■■□□□ 1.87
COL27A1-208ENST00000494780 ADAM17P78536 824 aa26.72■■□□□ 1.87
COL27A1-208ENST00000494780 HTRA4P83105 476 aaPredicted RBP26.72■■□□□ 1.87
COL27A1-208ENST00000494780 CDHR1Q96JP9 859 aa26.72■■□□□ 1.87
COL27A1-208ENST00000494780 ESYT1Q9BSJ8 1104 aa26.72■■□□□ 1.87
COL27A1-208ENST00000494780 DOCK5Q9H7D0 1870 aa26.72■■□□□ 1.87
COL27A1-208ENST00000494780 MICAL3Q7RTP6 2002 aa26.72■■□□□ 1.87
COL27A1-208ENST00000494780 CTSHP09668 335 aa26.71■■□□□ 1.87
COL27A1-208ENST00000494780 RXRAP19793 462 aa26.71■■□□□ 1.87
COL27A1-208ENST00000494780 SP4Q02446 784 aa26.71■■□□□ 1.87
COL27A1-208ENST00000494780 CMTR1Q8N1G2 835 aaKnown RBP26.71■■□□□ 1.87
COL27A1-208ENST00000494780 SP7Q8TDD2 431 aaPredicted RBP26.71■■□□□ 1.87
COL27A1-208ENST00000494780 TELO2Q9Y4R8 837 aa26.71■■□□□ 1.87
COL27A1-208ENST00000494780 SLC12A7Q9Y666 1083 aa26.71■■□□□ 1.87
COL27A1-208ENST00000494780 NRCAMQ92823 1304 aa26.7■■□□□ 1.87
COL27A1-208ENST00000494780 SIP14410 1827 aa26.7■■□□□ 1.87
COL27A1-208ENST00000494780 RBAK-RBAKDNI3L0D1 243 aa26.7■■□□□ 1.86
COL27A1-208ENST00000494780 ARHGAP4P98171 946 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms