RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 WNT8BQ93098 351 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 C16orf70Q9BSU1 422 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 KATNAL1Q9BW62 490 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 PRDM12Q9H4Q4 367 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 SLC28A3Q9HAS3 691 aa11.04□□□□□ -0.64
MSH5-218ENST00000494646 V9GY48 417 aaPredicted RBP11.04□□□□□ -0.64
MSH5-218ENST00000494646 PTPRSQ13332 1948 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 KLF18A0A0U1RQI7 1052 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 H3BRB1 525 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 ATP9AO75110 1047 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 LGALS2P05162 132 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 PFKMP08237 780 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 CKBP12277 381 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 SELPP16109 830 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 ATP2A2P16615 1042 aaKnown RBP11.03□□□□□ -0.64
MSH5-218ENST00000494646 RFC2P35250 354 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 ADD1P35611 737 aaKnown RBP11.03□□□□□ -0.64
MSH5-218ENST00000494646 FGD1P98174 961 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 NEDD9Q14511 834 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 RAB30Q15771 203 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 RTN1Q16799 776 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 TSGA10IPQ3SY00 556 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 PCNX4Q63HM2 1172 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 NLRX1Q86UT6 975 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.03□□□□□ -0.64
MSH5-218ENST00000494646 CCDC155Q8N6L0 562 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 CAGE1Q8TC20 777 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 AFAP1L1Q8TED9 768 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 INPP4AQ96PE3 977 aaPredicted RBP11.03□□□□□ -0.64
MSH5-218ENST00000494646 GAS2L1Q99501 681 aaPredicted RBP11.03□□□□□ -0.64
MSH5-218ENST00000494646 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 TUT1Q9H6E5 874 aaKnown RBP11.03□□□□□ -0.64
MSH5-218ENST00000494646 CERS4Q9HA82 394 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 PKD2L1Q9P0L9 805 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 PCDHA6Q9UN73 950 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 PCDHA8Q9Y5H6 950 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 TANC1Q9C0D5 1861 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 FRMPD4Q14CM0 1322 aa11.03□□□□□ -0.64
MSH5-218ENST00000494646 SPDYE3A6NKU9 549 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 RFXAPO00287 272 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 FIBPO43427 364 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 NBNO60934 754 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 STAM2O75886 525 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 HOXD8P13378 290 aaPredicted RBP11.02□□□□□ -0.65
MSH5-218ENST00000494646 IGFBP4P22692 258 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 CDC27P30260 824 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 APOBRQ0VD83 1088 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 PTK7Q13308 1070 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 ADGRE1Q14246 886 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 KRT32Q14532 448 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 CCDC85BQ15834 202 aaPredicted RBP11.02□□□□□ -0.65
MSH5-218ENST00000494646 TCTN1Q2MV58 587 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 ZNF618Q5T7W0 954 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 TYW1BQ6NUM6 668 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 METTL7BQ6UX53 244 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 Q6ZUG5 572 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 LRRC8DQ7L1W4 858 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 TMCO2Q7Z6W1 182 aaPredicted RBP11.02□□□□□ -0.65
MSH5-218ENST00000494646 ATP6V0A1Q93050 837 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 PGBD1Q96JS3 809 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 GPR20Q99678 358 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 SETD4Q9NVD3 440 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 RBM28Q9NW13 759 aaKnown RBP11.02□□□□□ -0.65
MSH5-218ENST00000494646 SNX14Q9Y5W7 946 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 TRANK1O15050 2925 aa11.02□□□□□ -0.65
MSH5-218ENST00000494646 C17orf102A2RUQ5 167 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 GOLGA8AA7E2F4 631 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 GOLGA8BA8MQT2 603 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 TREHO43280 583 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 SMIM10L2AP0DMW4 78 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 SMIM10L2BP0DMW5 78 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 ITGB5P18084 799 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 THPOP40225 353 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 NAPAP54920 295 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 TRIM71Q2Q1W2 868 aaKnown RBP11.01□□□□□ -0.65
MSH5-218ENST00000494646 PPP2R2DQ66LE6 453 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 WWC2Q6AWC2 1192 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 XRRA1Q6P2D8 792 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 TRIM50Q86XT4 487 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 USP38Q8NB14 1042 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 JAKMIP1Q96N16 626 aaKnown RBP11.01□□□□□ -0.65
MSH5-218ENST00000494646 SENP7Q9BQF6 1050 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 USP26Q9BXU7 913 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 PRDM6Q9NQX0 595 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
MSH5-218ENST00000494646 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 CNTNAP5Q8WYK1 1306 aa11.01□□□□□ -0.65
MSH5-218ENST00000494646 GSTTP1A0A1W2PQM5 241 aa11□□□□□ -0.65
MSH5-218ENST00000494646 SMCO2A6NFE2 343 aa11□□□□□ -0.65
MSH5-218ENST00000494646 KIF28PB7ZC32 967 aa11□□□□□ -0.65
MSH5-218ENST00000494646 PPFIA3O75145 1194 aa11□□□□□ -0.65
MSH5-218ENST00000494646 CA3P07451 260 aa11□□□□□ -0.65
MSH5-218ENST00000494646 HMGB1P09429 215 aaKnown RBP11□□□□□ -0.65
MSH5-218ENST00000494646 HSPA4P34932 840 aa11□□□□□ -0.65
MSH5-218ENST00000494646 TCF7P36402 384 aaPredicted RBP11□□□□□ -0.65
MSH5-218ENST00000494646 KCNJ6P48051 423 aa11□□□□□ -0.65
MSH5-218ENST00000494646 FUT2Q10981 343 aa11□□□□□ -0.65
MSH5-218ENST00000494646 TRAF7Q6Q0C0 670 aa11□□□□□ -0.65
MSH5-218ENST00000494646 HERC6Q8IVU3 1022 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 386.7 ms