RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 SPRED2Q7Z698 418 aa10.52□□□□□ -0.73
NFIA-213ENST00000493627 SERINC5Q86VE9 423 aa10.52□□□□□ -0.73
NFIA-213ENST00000493627 IL27Q8NEV9 243 aa10.52□□□□□ -0.73
NFIA-213ENST00000493627 ADAMTS19Q8TE59 1207 aa10.52□□□□□ -0.73
NFIA-213ENST00000493627 RRP36Q96EU6 259 aaKnown RBP10.52□□□□□ -0.73
NFIA-213ENST00000493627 MTA3Q9BTC8 594 aa10.52□□□□□ -0.73
NFIA-213ENST00000493627 TUT1Q9H6E5 874 aaKnown RBP10.52□□□□□ -0.73
NFIA-213ENST00000493627 SEC63Q9UGP8 760 aaKnown RBP10.52□□□□□ -0.73
NFIA-213ENST00000493627 MTCH2Q9Y6C9 303 aa10.52□□□□□ -0.73
NFIA-213ENST00000493627 COL4A4P53420 1690 aaPredicted RBP10.52□□□□□ -0.73
NFIA-213ENST00000493627 REV3LO60673 3130 aa10.52□□□□□ -0.73
NFIA-213ENST00000493627 PTPRSQ13332 1948 aa10.52□□□□□ -0.73
NFIA-213ENST00000493627 EMSYQ7Z589 1322 aa10.52□□□□□ -0.73
NFIA-213ENST00000493627 MYO9BQ13459 2157 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 C17orf102A2RUQ5 167 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 SPATA31C2B4DYI2 1134 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 RBAK-RBAKDNI3L0D1 243 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 PIK3CDO00329 1044 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 SH2B2O14492 632 aaPredicted RBP10.51□□□□□ -0.73
NFIA-213ENST00000493627 LGR5O75473 907 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 GJB5O95377 273 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 PLEKHA8P1O95397 391 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 SMIM10L2AP0DMW4 78 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 SMIM10L2BP0DMW5 78 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 HOXC8P31273 242 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 MCM5P33992 734 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 THPOP40225 353 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 GNAQP50148 359 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 SEMA3FQ13275 785 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 NEDD9Q14511 834 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 KRT40Q6A162 431 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 USP17L6PQ6QN14 398 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 NFXL1Q6ZNB6 911 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 CYFIP1Q7L576 1253 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 TRIM50Q86XT4 487 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 CUL5Q93034 780 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 ATP6V0A1Q93050 837 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 TMEM87BQ96K49 555 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 UHRF1Q96T88 793 aaPredicted RBP10.51□□□□□ -0.73
NFIA-213ENST00000493627 LZTS2Q9BRK4 669 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 ZBED2Q9BTP6 218 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 LSG1Q9H089 658 aaKnown RBP10.51□□□□□ -0.73
NFIA-213ENST00000493627 BCAS3Q9H6U6 928 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 RTEL1Q9NZ71 1219 aa10.51□□□□□ -0.73
NFIA-213ENST00000493627 CCDC69A6NI79 296 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 RSPH10B2B2RC85 870 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 MEIS2O14770 477 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 SLC27A2O14975 620 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 LPXNO60711 386 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 CTSHP09668 335 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 RSPH10BP0C881 870 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 RXRAP19793 462 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 SMARCA1P28370 1054 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 SP4Q02446 784 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 TFF2Q03403 129 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 GRB10Q13322 594 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 COL9A3Q14050 684 aaPredicted RBP10.5□□□□□ -0.73
NFIA-213ENST00000493627 IKBKEQ14164 716 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 PCNX4Q63HM2 1172 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 CMTR1Q8N1G2 835 aaKnown RBP10.5□□□□□ -0.73
NFIA-213ENST00000493627 GPR20Q99678 358 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 ESYT1Q9BSJ8 1104 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 USP26Q9BXU7 913 aa10.5□□□□□ -0.73
NFIA-213ENST00000493627 ZNF215Q9UL58 517 aaPredicted RBP10.5□□□□□ -0.73
NFIA-213ENST00000493627 BAZ2BQ9UIF8 2168 aaKnown RBP10.5□□□□□ -0.73
NFIA-213ENST00000493627 PRRC2BQ5JSZ5 2229 aaKnown RBP10.49□□□□□ -0.73
NFIA-213ENST00000493627 TRIP12Q14669 1992 aaPredicted RBP10.49□□□□□ -0.73
NFIA-213ENST00000493627 TREHO43280 583 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 CAND2O75155 1236 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 CALM1P0DP23 149 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 CALM2P0DP24 149 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 CALM3P0DP25 149 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 LIFRP42702 1097 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 PLCB2Q00722 1185 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 AAK1Q2M2I8 961 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 PLEKHG4Q58EX7 1191 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 CREB3L3Q68CJ9 461 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 FAM117BQ6P1L5 589 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 XRRA1Q6P2D8 792 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.49□□□□□ -0.73
NFIA-213ENST00000493627 RAB11FIP4Q86YS3 637 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 TMTC2Q8N394 836 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 SRBD1Q8N5C6 995 aaKnown RBP10.49□□□□□ -0.73
NFIA-213ENST00000493627 DBF4BQ8NFT6 615 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 GDPD5Q8WTR4 605 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 RAD9AQ99638 391 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 SENP7Q9BQF6 1050 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 RNPEPQ9H4A4 650 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 MTUS1Q9ULD2 1270 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 TELO2Q9Y4R8 837 aa10.49□□□□□ -0.73
NFIA-213ENST00000493627 LINC01553A4QN01 128 aa10.48□□□□□ -0.73
NFIA-213ENST00000493627 AMHP03971 560 aa10.48□□□□□ -0.73
NFIA-213ENST00000493627 GNAT1P11488 350 aa10.48□□□□□ -0.73
NFIA-213ENST00000493627 KCNQ1P51787 676 aa10.48□□□□□ -0.73
NFIA-213ENST00000493627 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
NFIA-213ENST00000493627 UTP14CQ5TAP6 766 aaKnown RBP10.48□□□□□ -0.73
NFIA-213ENST00000493627 TMTC3Q6ZXV5 915 aa10.48□□□□□ -0.73
NFIA-213ENST00000493627 NLRX1Q86UT6 975 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms