RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 LIMS2Q7Z4I7 341 aa5.26□□□□□ -1.57
VPS36-205ENST00000492650 TRIM48Q8IWZ4 208 aa5.26□□□□□ -1.57
VPS36-205ENST00000492650 C8orf49Q96NF6 230 aa5.26□□□□□ -1.57
VPS36-205ENST00000492650 SAMD11Q96NU1 681 aa5.26□□□□□ -1.57
VPS36-205ENST00000492650 AARSD1Q9BTE6 412 aaKnown RBP5.26□□□□□ -1.57
VPS36-205ENST00000492650 CDIP1Q9H305 208 aa5.26□□□□□ -1.57
VPS36-205ENST00000492650 SLC6A20Q9NP91 592 aa5.26□□□□□ -1.57
VPS36-205ENST00000492650 PPARGC1AQ9UBK2 798 aaKnown RBP5.26□□□□□ -1.57
VPS36-205ENST00000492650 ASH2LQ9UBL3 628 aa5.26□□□□□ -1.57
VPS36-205ENST00000492650 FTSJ1Q9UET6 329 aa5.26□□□□□ -1.57
VPS36-205ENST00000492650 B4GALT3O60512 393 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 COL6A2P12110 1019 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 SURF1Q15526 300 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 CPZQ66K79 652 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 CYP4F22Q6NT55 531 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 TRMT10BQ6PF06 316 aaKnown RBP5.25□□□□□ -1.57
VPS36-205ENST00000492650 KCNT2Q6UVM3 1135 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 RSPO2Q6UXX9 243 aaPredicted RBP5.25□□□□□ -1.57
VPS36-205ENST00000492650 RBM12BQ8IXT5 1001 aaKnown RBP5.25□□□□□ -1.57
VPS36-205ENST00000492650 SGSM3Q96HU1 749 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 WRNIP1Q96S55 665 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 KCNJ15Q99712 375 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 JADE2Q9NQC1 790 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 RBPJLQ9UBG7 517 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 MYRFQ9Y2G1 1151 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 ZDHHC9Q9Y397 364 aa5.25□□□□□ -1.57
VPS36-205ENST00000492650 KLF4O43474 513 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 LAMTOR5O43504 91 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 VASNQ6EMK4 673 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 NSMFQ6X4W1 530 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 PLEKHH3Q7Z736 793 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 SLC43A3Q8NBI5 491 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 DCAF4Q8WV16 495 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 CLEC4DQ8WXI8 215 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 YTHDC1Q96MU7 727 aaKnown RBP5.24□□□□□ -1.57
VPS36-205ENST00000492650 TMPRSS5Q9H3S3 457 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 WASF3Q9UPY6 502 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 NUB1Q9Y5A7 615 aa5.24□□□□□ -1.57
VPS36-205ENST00000492650 NPEPPSL1A6NEC2 478 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 B4GALT4O60513 344 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 GNAT1P11488 350 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 PABPC1P11940 636 aaKnown RBP5.23□□□□□ -1.57
VPS36-205ENST00000492650 GRK2P25098 689 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 GRK3P35626 688 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 RBM25P49756 843 aaKnown RBP5.23□□□□□ -1.57
VPS36-205ENST00000492650 SPIRE1Q08AE8 756 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 KIZQ2M2Z5 673 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 PHF19Q5T6S3 580 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 LBX2Q6XYB7 198 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 OTOP3Q7RTS5 596 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 KBTBD2Q8IY47 623 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 TTC9BQ8N6N2 239 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 ZCCHC14Q8WYQ9 949 aaKnown RBP5.23□□□□□ -1.57
VPS36-205ENST00000492650 TRIM55Q9BYV6 548 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 BARX1Q9HBU1 254 aaPredicted RBP5.23□□□□□ -1.57
VPS36-205ENST00000492650 ARHGEF4Q9NR80 690 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 ST6GALNAC2Q9UJ37 374 aa5.23□□□□□ -1.57
VPS36-205ENST00000492650 TRAV20A0A0B4J274 112 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 BLACEA4D250 179 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 FBXO21O94952 628 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 FGFR1P11362 822 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 ZNF20P17024 532 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 IFRD2Q12894 506 aaPredicted RBP5.22□□□□□ -1.57
VPS36-205ENST00000492650 TUSC3Q13454 348 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 NTRK3Q16288 839 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 ARHGEF18Q6ZSZ5 1173 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 IFNL3Q8IZI9 196 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 KLHL36Q8N4N3 616 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 ST13P5Q8NFI4 369 aaPredicted RBP5.22□□□□□ -1.57
VPS36-205ENST00000492650 TTLL11Q8NHH1 800 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 OSBP2Q969R2 916 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 GMLQ99445 158 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 SSBP3Q9BWW4 388 aaPredicted RBP5.22□□□□□ -1.57
VPS36-205ENST00000492650 DLL4Q9NR61 685 aa5.22□□□□□ -1.57
VPS36-205ENST00000492650 PPP1R1BQ9UD71 204 aaPredicted RBP5.22□□□□□ -1.57
VPS36-205ENST00000492650 NKRFO15226 690 aaKnown RBP eCLIP5.21□□□□□ -1.58
VPS36-205ENST00000492650 LTFP02788 710 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 CKMP06732 381 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 GLRBP48167 497 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 GPR85P60893 370 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 PPP2CBP62714 309 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 PPP2CAP67775 309 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 NFATC3Q12968 1075 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 RAB33AQ14088 237 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 PAN2Q504Q3 1202 aaKnown RBP5.21□□□□□ -1.58
VPS36-205ENST00000492650 YOD1Q5VVQ6 348 aaPredicted RBP5.21□□□□□ -1.58
VPS36-205ENST00000492650 LRRC47Q8N1G4 583 aaKnown RBP5.21□□□□□ -1.58
VPS36-205ENST00000492650 IGDCC4Q8TDY8 1250 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 MBD6Q96DN6 1003 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 ZFYVE21Q9BQ24 234 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 HSPBP1Q9NZL4 362 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 PPP4R1LQ9P1A2 415 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 DSEQ9UL01 958 aa5.21□□□□□ -1.58
VPS36-205ENST00000492650 FAM47E-STBD1D6RA91 191 aa5.2□□□□□ -1.58
VPS36-205ENST00000492650 U2SURPO15042 1029 aaKnown RBP5.2□□□□□ -1.58
VPS36-205ENST00000492650 STK10O94804 968 aaKnown RBP5.2□□□□□ -1.58
VPS36-205ENST00000492650 SOD2P04179 222 aa5.2□□□□□ -1.58
VPS36-205ENST00000492650 ENO2P09104 434 aaPredicted RBP5.2□□□□□ -1.58
VPS36-205ENST00000492650 FAHP16930 419 aa5.2□□□□□ -1.58
VPS36-205ENST00000492650 SMAD2Q15796 467 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms