RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 PPP1R9AQ9ULJ8 1098 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 RLFQ13129 1914 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 UNCXA6NJT0 531 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 DSG3P32926 999 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 TRIM14Q14142 442 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
COL16A1-215ENST00000488897 PDXDC2PQ6P474 469 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 SRGAP1Q7Z6B7 1085 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 UBXN6Q9BZV1 441 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 RBPJLQ9UBG7 517 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 CDC23Q9UJX2 597 aa20.44■□□□□ 0.86
COL16A1-215ENST00000488897 GYPCP04921 128 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 NOGQ13253 232 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 CRHR2Q13324 411 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 TAF1CQ15572 869 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-215ENST00000488897 PFKFB3Q16875 520 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-215ENST00000488897 GPATCH4Q5T3I0 446 aaKnown RBP20.43■□□□□ 0.86
COL16A1-215ENST00000488897 ARL6IP4Q66PJ3 421 aaKnown RBP20.43■□□□□ 0.86
COL16A1-215ENST00000488897 PIK3AP1Q6ZUJ8 805 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 PRPF38AQ8NAV1 312 aaKnown RBP20.43■□□□□ 0.86
COL16A1-215ENST00000488897 IRX2Q9BZI1 471 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-215ENST00000488897 FEM1BQ9UK73 627 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 MANSC4A6NHS7 340 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-215ENST00000488897 N4BP3O15049 544 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 PAK1Q13153 545 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 KRT31Q15323 416 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 HEATR3Q7Z4Q2 680 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 HHIPL1Q96JK4 782 aa20.43■□□□□ 0.86
COL16A1-215ENST00000488897 PURBQ96QR8 312 aaKnown RBP20.43■□□□□ 0.86
COL16A1-215ENST00000488897 ZNF536O15090 1300 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 CALML3P27482 149 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 CHMP4BP1P59074 171 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 CAP1Q01518 475 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 BRD3Q15059 726 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 STAMQ92783 540 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 BLZF1Q9H2G9 400 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 RIOX1Q9H6W3 641 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 COL11A1P12107 1806 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-215ENST00000488897 CCDC151A5D8V7 595 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 POTEB2H3BUK9 544 aa20.42■□□□□ 0.86
COL16A1-215ENST00000488897 HOXA7P31268 230 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-215ENST00000488897 LONP1P36776 959 aaKnown RBP20.42■□□□□ 0.86
COL16A1-215ENST00000488897 FXR1P51114 621 aaKnown RBP eCLIP20.42■□□□□ 0.86
COL16A1-215ENST00000488897 ZNF658Q5TYW1 1059 aaPredicted RBP20.42■□□□□ 0.86
COL16A1-215ENST00000488897 CYP2C19P33261 490 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 MCM7P33993 719 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 NT5C2P49902 561 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 COPB1P53618 953 aaKnown RBP20.41■□□□□ 0.86
COL16A1-215ENST00000488897 ZNF569Q5MCW4 686 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 DNAJC5GQ8N7S2 189 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 MKI67P46013 3256 aaKnown RBP20.41■□□□□ 0.86
COL16A1-215ENST00000488897 LOC285556D6RIA3 1793 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 CNMDO75829 334 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 CCT6AP40227 531 aaKnown RBP20.41■□□□□ 0.86
COL16A1-215ENST00000488897 WDR78Q5VTH9 848 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 WWC2Q6AWC2 1192 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 CHURC1Q8WUH1 139 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 PORCNQ9H237 461 aa20.41■□□□□ 0.86
COL16A1-215ENST00000488897 DNAH12Q6ZR08 3092 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 TESPA1A2RU30 521 aaPredicted RBP20.4■□□□□ 0.86
COL16A1-215ENST00000488897 CTAGE9A4FU28 777 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 SASH3O75995 380 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 ALAS1P13196 640 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 MUM1L1Q5H9M0 696 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 BTNL9Q6UXG8 535 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 CYP26C1Q6V0L0 522 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 ANKRD23Q86SG2 305 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 NELFBQ8WX92 580 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 MYO1AQ9UBC5 1043 aa20.4■□□□□ 0.86
COL16A1-215ENST00000488897 RPN1P04843 607 aaKnown RBP20.39■□□□□ 0.86
COL16A1-215ENST00000488897 TM4SF4P48230 202 aa20.39■□□□□ 0.86
COL16A1-215ENST00000488897 IL17AQ16552 155 aa20.39■□□□□ 0.86
COL16A1-215ENST00000488897 TCP11X2Q5H9J9 407 aa20.39■□□□□ 0.86
COL16A1-215ENST00000488897 MTRQ99707 1265 aa20.39■□□□□ 0.86
COL16A1-215ENST00000488897 SLC38A10Q9HBR0 1119 aa20.39■□□□□ 0.86
COL16A1-215ENST00000488897 ABHD10Q9NUJ1 306 aa20.39■□□□□ 0.86
COL16A1-215ENST00000488897 PARP14Q460N5 1801 aa20.39■□□□□ 0.85
COL16A1-215ENST00000488897 SMC1AQ14683 1233 aaKnown RBP20.39■□□□□ 0.85
COL16A1-215ENST00000488897 SNRNP48Q6IEG0 339 aaKnown RBP20.39■□□□□ 0.85
COL16A1-215ENST00000488897 RRP36Q96EU6 259 aaKnown RBP20.39■□□□□ 0.85
COL16A1-215ENST00000488897 ZFP91Q96JP5 570 aaPredicted RBP20.39■□□□□ 0.85
COL16A1-215ENST00000488897 VPS16Q9H269 839 aa20.39■□□□□ 0.85
COL16A1-215ENST00000488897 EFCC1Q9HA90 598 aa20.39■□□□□ 0.85
COL16A1-215ENST00000488897 SH3GLB2Q9NR46 395 aa20.39■□□□□ 0.85
COL16A1-215ENST00000488897 HOXC10Q9NYD6 342 aa20.39■□□□□ 0.85
COL16A1-215ENST00000488897 ZNF214Q9UL59 606 aaPredicted RBP20.39■□□□□ 0.85
COL16A1-215ENST00000488897 KCNJ18B7U540 433 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 ZBTB5O15062 677 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 OSBPP22059 807 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 KCNJ12Q14500 433 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 REPS2Q8NFH8 660 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 FUT8Q9BYC5 575 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 PCDHA1Q9Y5I3 950 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 BLIDQ8IZY5 108 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 RASGRP4Q8TDF6 673 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 HNRNPLLQ8WVV9 542 aaKnown RBP20.38■□□□□ 0.85
COL16A1-215ENST00000488897 SPZ1Q9BXG8 430 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 ARHGAP39Q9C0H5 1083 aa20.38■□□□□ 0.85
COL16A1-215ENST00000488897 RANBP17Q9H2T7 1088 aaKnown RBP20.38■□□□□ 0.85
COL16A1-215ENST00000488897 RNF186Q9NXI6 227 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms