RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 NEFLP07196 543 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 IQCF3P0C7M6 154 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 ZNF286BP0CG31 522 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 NEDD9Q14511 834 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 MFSD10Q14728 455 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 RTN1Q16799 776 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 GDF6Q6KF10 455 aaPredicted RBP16.57■□□□□ 0.24
CLDN11-207ENST00000486975 PPP1R18Q6NYC8 613 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 METTL7BQ6UX53 244 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 FBXL16Q8N461 479 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 ZNF713Q8N859 430 aaPredicted RBP16.57■□□□□ 0.24
CLDN11-207ENST00000486975 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 RETREG2Q8NC44 543 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 AFAP1L1Q8TED9 768 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.24
CLDN11-207ENST00000486975 TCEANC2Q96MN5 208 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 FAM161BQ96MY7 647 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
CLDN11-207ENST00000486975 SENP7Q9BQF6 1050 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 MLXIPQ9HAP2 919 aa16.57■□□□□ 0.24
CLDN11-207ENST00000486975 CXXC1Q9P0U4 656 aaPredicted RBP16.57■□□□□ 0.24
CLDN11-207ENST00000486975 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
CLDN11-207ENST00000486975 OTOP2Q7RTS6 562 aa16.56■□□□□ 0.24
CLDN11-207ENST00000486975 CCDC82Q8N4S0 544 aa16.56■□□□□ 0.24
CLDN11-207ENST00000486975 PPP1R13LQ8WUF5 828 aa16.56■□□□□ 0.24
CLDN11-207ENST00000486975 TIFAQ96CG3 184 aa16.56■□□□□ 0.24
CLDN11-207ENST00000486975 C16orf70Q9BSU1 422 aa16.56■□□□□ 0.24
CLDN11-207ENST00000486975 PBX4Q9BYU1 374 aa16.56■□□□□ 0.24
CLDN11-207ENST00000486975 HDAC6Q9UBN7 1215 aa16.56■□□□□ 0.24
CLDN11-207ENST00000486975 TANC1Q9C0D5 1861 aa16.56■□□□□ 0.24
CLDN11-207ENST00000486975 NID2Q14112 1375 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 KLF18A0A0U1RQI7 1052 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 PARNO95453 639 aaKnown RBP16.55■□□□□ 0.24
CLDN11-207ENST00000486975 CHMP4BP1P59074 171 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 RAB30Q15771 203 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 HEATR3Q7Z4Q2 680 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 NLRX1Q86UT6 975 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 GIMAP8Q8ND71 665 aaPredicted RBP16.55■□□□□ 0.24
CLDN11-207ENST00000486975 GPRASP2Q96D09 838 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 CDHR1Q96JP9 859 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
CLDN11-207ENST00000486975 SNX14Q9Y5W7 946 aa16.55■□□□□ 0.24
CLDN11-207ENST00000486975 LAMA2P24043 3122 aaKnown RBP16.54■□□□□ 0.24
CLDN11-207ENST00000486975 CCDC196A0A1B0GTZ2 297 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 SPDYE3A6NKU9 549 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 GOLGA8AA7E2F4 631 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 GOLGA8BA8MQT2 603 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 NOP56O00567 594 aaKnown RBP16.54■□□□□ 0.24
CLDN11-207ENST00000486975 ACTN1P12814 892 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 HOXC8P31273 242 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 PTK7Q13308 1070 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 WWC2Q6AWC2 1192 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 BLOC1S2Q6QNY1 142 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
CLDN11-207ENST00000486975 ALG1Q9BT22 464 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 AGXT2Q9BYV1 514 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 RTEL1Q9NZ71 1219 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 SLC4A7Q9Y6M7 1214 aa16.54■□□□□ 0.24
CLDN11-207ENST00000486975 GRXCR1A8MXD5 290 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 H3BRB1 525 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 MAFGO15525 162 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 LGALS2P05162 132 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 SELPP16109 830 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 PBX2P40425 430 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 UBE2SQ16763 222 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 TYW1BQ6NUM6 668 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 CYFIP1Q7L576 1253 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 SLC17A8Q8NDX2 589 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 JAKMIP1Q96N16 626 aaKnown RBP16.53■□□□□ 0.24
CLDN11-207ENST00000486975 GPR20Q99678 358 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 GLT8D2Q9H1C3 349 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 ZNF576Q9H609 170 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 TUT1Q9H6E5 874 aaKnown RBP16.53■□□□□ 0.24
CLDN11-207ENST00000486975 BCAS3Q9H6U6 928 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 EHMT1Q9H9B1 1298 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 RIC8AQ9NPQ8 531 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 MSRAQ9UJ68 235 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 PCDHA6Q9UN73 950 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 PCDHA8Q9Y5H6 950 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 UBIAD1Q9Y5Z9 338 aa16.53■□□□□ 0.24
CLDN11-207ENST00000486975 SORBS3O60504 671 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 BAIAP3O94812 1187 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 FOSP01100 380 aaPredicted RBP16.52■□□□□ 0.24
CLDN11-207ENST00000486975 ITGB5P18084 799 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 PSMA5P28066 241 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 CDC27P30260 824 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 NAPAP54920 295 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 FGD1P98174 961 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 TRIM71Q2Q1W2 868 aaKnown RBP16.52■□□□□ 0.24
CLDN11-207ENST00000486975 ERICH6BQ5W0A0 696 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 LRRC8DQ7L1W4 858 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 DEFB128Q7Z7B8 93 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 BARHL2Q9NY43 387 aa16.52■□□□□ 0.24
CLDN11-207ENST00000486975 V9GY48 417 aaPredicted RBP16.52■□□□□ 0.24
CLDN11-207ENST00000486975 MYH7BA7E2Y1 1941 aa16.52■□□□□ 0.23
CLDN11-207ENST00000486975 STXBP3O00186 592 aa16.51■□□□□ 0.23
CLDN11-207ENST00000486975 CXCL10P02778 98 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms