RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 GOLGA6L4A6NEF3 574 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 FAM25EA8MYX2 175 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 NFKBIEO00221 500 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 EIF3FO00303 357 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 EFSO43281 561 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 FSBPO95073 299 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PENKP01210 267 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CA8P35219 290 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 MASP1P48740 699 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ARPC4P59998 168 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CLCQ05315 142 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 TRIM29Q14134 588 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 KCNB1Q14721 858 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 TPD52L1Q16890 204 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 GNPTABQ3T906 1256 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PLEKHO1Q53GL0 409 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 C2orf27AQ580R0 203 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CCDC158Q5M9N0 1113 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 IQCEQ6IPM2 695 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 C11orf96Q7Z7L8 435 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CCDC84Q86UT8 332 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 LSRQ86X29 649 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CEP57L1Q8IYX8 460 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 GALNT15Q8N3T1 639 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 TRIM58Q8NG06 486 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 OR6P1Q8NGX9 317 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PPP2R3CQ969Q6 453 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 NXPE3Q969Y0 559 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 GSDMAQ96QA5 445 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 IWS1Q96ST2 819 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PARD6BQ9BYG5 372 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 INO80BQ9C086 356 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 VCX3BQ9H321 246 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 KCNF1Q9H3M0 494 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 L2HGDHQ9H9P8 463 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 STRN4Q9NRL3 753 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 KCND1Q9NSA2 647 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 DDX25Q9UHL0 483 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ZNRF3Q9ULT6 936 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 EXOC6BQ9Y2D4 811 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ZNF652Q9Y2D9 606 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 MLH3Q9UHC1 1453 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 GPRASP1Q5JY77 1395 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PIK3R4Q99570 1358 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 KIF15Q9NS87 1388 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ENO4A6NNW6 628 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ATXN7O15265 892 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ZBED4O75132 1171 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CILPO75339 1184 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 GJB6O95452 261 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 S100BP04271 92 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 FAM157BP0CG42 384 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 TROVE2P10155 538 aaKnown RBP eCLIP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CASTP20810 708 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ARHGAP25P42331 645 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CCT8P50990 548 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PHEXP78562 749 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 NUCB1Q02818 461 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PLAURQ03405 335 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 MYBPC3Q14896 1274 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 USH1GQ495M9 461 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PRRT3Q5FWE3 981 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 RPS26P11Q5JNZ5 115 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 EFHC2Q5JST6 749 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CEP85LQ5SZL2 805 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ATF7IPQ6VMQ6 1270 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 TMC6Q7Z403 805 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 REC114Q7Z4M0 266 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CEP57Q86XR8 500 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CLASRPQ8N2M8 674 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 TMEM102Q8N9M5 508 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ENOX1Q8TC92 643 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 SCYL1Q96KG9 808 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 C16orf45Q96MC5 204 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 ZMAT2Q96NC0 199 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PAGR1Q9BTK6 254 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PLVAPQ9BX97 442 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 OSBPL10Q9BXB5 764 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CAPS2Q9BXY5 557 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 TAOK3Q9H2K8 898 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 DHX36Q9H2U1 1008 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PCDH18Q9HCL0 1135 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PICK1Q9NRD5 415 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PAPOLBQ9NRJ5 636 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 TMEM39AQ9NV64 488 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 MKS1Q9NXB0 559 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 CFDP1Q9UEE9 299 aaPredicted RBP6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 PFDN2Q9UHV9 154 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 GGA1Q9UJY5 639 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 TTLL3Q9Y4R7 772 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 SLC30A1Q9Y6M5 507 aa6.66□□□□□ -1.34
ECHDC1-215ENST00000475319 AGLP35573 1532 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 CCDC194A0A1B0GVG4 234 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 TARSL2A2RTX5 802 aaKnown RBP6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 TBKBP1A7MCY6 615 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 M0R2C6 588 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 EBAG9O00559 213 aa6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 KHNYNO15037 678 aaKnown RBP6.65□□□□□ -1.35
ECHDC1-215ENST00000475319 TTI1O43156 1089 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms