RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 XRRA1Q6P2D8 792 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 PI16Q6UXB8 463 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 HNRNPLLQ8WVV9 542 aaKnown RBP8.04□□□□□ -1.12
HDAC3-206ENST00000471968 ACSF2Q96CM8 615 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-206ENST00000471968 CLMPQ9H6B4 373 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 SH2D4AQ9H788 454 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 RAVER2Q9HCJ3 691 aaKnown RBP8.04□□□□□ -1.12
HDAC3-206ENST00000471968 VTA1Q9NP79 307 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 GTF2IRD1Q9UHL9 959 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 COG6Q9Y2V7 657 aa8.04□□□□□ -1.12
HDAC3-206ENST00000471968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-206ENST00000471968 THPOP40225 353 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 ERVFC1P60507 584 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 PPP4CP60510 307 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 ICA1Q05084 483 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 STPG1Q5TH74 334 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 NAA16Q6N069 864 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-206ENST00000471968 RUFY4Q6ZNE9 571 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC3-206ENST00000471968 ADGRA1Q86SQ6 560 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 SIAH1Q8IUQ4 282 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 C7orf31Q8N865 590 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 CHST13Q8NET6 341 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 NELL1Q92832 810 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 ZFP91Q96JP5 570 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-206ENST00000471968 SLF1Q9BQI6 1058 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 BCO2Q9BYV7 579 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 OSBPL7Q9BZF2 842 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 ARHGEF3Q9NR81 526 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 KCNK4Q9NYG8 393 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 CEP126Q9P2H0 1117 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 LRP2BPQ9P2M1 347 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 HDAC6Q9UBN7 1215 aa8.03□□□□□ -1.12
HDAC3-206ENST00000471968 CTDP1Q9Y5B0 961 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-206ENST00000471968 A6NJR5 290 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 USP5P45974 858 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 TROAPQ12815 778 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 SF3A2Q15428 464 aaKnown RBP8.02□□□□□ -1.13
HDAC3-206ENST00000471968 ATAT1Q5SQI0 421 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 RARS2Q5T160 578 aaKnown RBP8.02□□□□□ -1.13
HDAC3-206ENST00000471968 PLPP4Q5VZY2 271 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 KIAA1211LQ6NV74 962 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 TMEM179Q6ZVK1 233 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 TTC6Q86TZ1 520 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 RASGRP4Q8TDF6 673 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 GPR152Q8TDT2 470 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 RSAD2Q8WXG1 361 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 SLC39A7Q92504 469 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 CASP10Q92851 521 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 COPS5Q92905 334 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 ZNF689Q96CS4 500 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-206ENST00000471968 MYL10Q9BUA6 226 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 HMG20BQ9P0W2 317 aa8.02□□□□□ -1.13
HDAC3-206ENST00000471968 LAMA1P25391 3075 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 TICRRQ7Z2Z1 1910 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 ATP2A1O14983 1001 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 ZBED4O75132 1171 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 DYNLL1P63167 89 aaKnown RBP8.01□□□□□ -1.13
HDAC3-206ENST00000471968 PDE4BQ07343 736 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 TWISTNBQ3B726 338 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-206ENST00000471968 PAN2Q504Q3 1202 aaKnown RBP8.01□□□□□ -1.13
HDAC3-206ENST00000471968 KIAA1841Q6NSI8 718 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 KANK3Q6NY19 840 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 DCLRE1AQ6PJP8 1040 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-206ENST00000471968 CELF5Q8N6W0 485 aaKnown RBP8.01□□□□□ -1.13
HDAC3-206ENST00000471968 C12orf76Q8N812 135 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-206ENST00000471968 C12orf50Q8NA57 414 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-206ENST00000471968 SPATA5Q8NB90 893 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 NUP88Q99567 741 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-206ENST00000471968 MKNK1Q9BUB5 465 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 A1CFQ9NQ94 594 aaKnown RBP8.01□□□□□ -1.13
HDAC3-206ENST00000471968 IGSF9Q9P2J2 1179 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 NOTCH2Q04721 2471 aa8.01□□□□□ -1.13
HDAC3-206ENST00000471968 HYAL3O43820 417 aaPredicted RBP8□□□□□ -1.13
HDAC3-206ENST00000471968 ALDH1L1O75891 902 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 DGKIO75912 1065 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 CTSHP09668 335 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 SRFP11831 508 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 TIMM10P62072 90 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 UBE3AQ05086 875 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 APOBRQ0VD83 1088 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 PPP2R5BQ15173 497 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 OTOP3Q7RTS5 596 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 KAT2BQ92831 832 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 ALG1Q9BT22 464 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 ACAD9Q9H845 621 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 AAASQ9NRG9 546 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 NEUROG3Q9Y4Z2 214 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 HCFC2Q9Y5Z7 792 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 FOCADQ5VW36 1801 aa8□□□□□ -1.13
HDAC3-206ENST00000471968 HIDE1A8MVS5 230 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 PYCARD-AS1I3L0S3 204 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 FSCN2O14926 492 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 RFX5P48382 616 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-206ENST00000471968 EVX2Q03828 476 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 CALD1Q05682 793 aaKnown RBP7.99□□□□□ -1.13
HDAC3-206ENST00000471968 SIM2Q14190 667 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-206ENST00000471968 CMTR2Q8IYT2 770 aaKnown RBP7.99□□□□□ -1.13
HDAC3-206ENST00000471968 ZNF843Q8N446 348 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms