RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 TBCKQ8TEA7 893 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 SNX29Q8TEQ0 813 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 HDAC7Q8WUI4 952 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 CNOT10Q9H9A5 744 aaKnown RBP6.97□□□□□ -1.29
PSMD6-204ENST00000467853 DIS3Q9Y2L1 958 aaKnown RBP6.97□□□□□ -1.29
PSMD6-204ENST00000467853 SAMM50Q9Y512 469 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 PCDHGC5Q9Y5F6 944 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 GCFC2P16383 781 aaKnown RBP6.97□□□□□ -1.29
PSMD6-204ENST00000467853 CXCR5P32302 372 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 SLC1A4P43007 532 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 RPS8P62241 208 aaKnown RBP6.97□□□□□ -1.29
PSMD6-204ENST00000467853 GFPT1Q06210 699 aaPredicted RBP6.97□□□□□ -1.29
PSMD6-204ENST00000467853 ODF2Q5BJF6 829 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 SPDYCQ5MJ68 293 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 GIMAP7Q8NHV1 300 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 NLRP3Q96P20 1036 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 TMEM47Q9BQJ4 181 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 FAM114A2Q9NRY5 505 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 BTG4Q9NY30 223 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 NHSL1Q5SYE7 1610 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.97□□□□□ -1.29
PSMD6-204ENST00000467853 ANKRD65E5RJM6 399 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 CETN3O15182 167 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 CYP2D6P10635 497 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 ATP1A2P50993 1020 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 EIF3BP55884 814 aaKnown RBP6.97□□□□□ -1.29
PSMD6-204ENST00000467853 RAPGEF1Q13905 1077 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 KIAA0753Q2KHM9 967 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 SLC10A5Q5PT55 438 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 FAM26FQ5R3K3 315 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 NAA35Q5VZE5 725 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 USP38Q8NB14 1042 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 PSMB7Q99436 277 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 NAP1L3Q99457 506 aaPredicted RBP6.97□□□□□ -1.29
PSMD6-204ENST00000467853 SLITRK6Q9H5Y7 841 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 TMBIM4Q9HC24 238 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 PLAAQ9Y263 795 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 PHLPP1O60346 1717 aa6.97□□□□□ -1.29
PSMD6-204ENST00000467853 MYMKA6NI61 221 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 E7EVH7 732 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 NCK2O43639 380 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 FLOT1O75955 427 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 MYH1P12882 1939 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 CARSP49589 748 aaKnown RBP6.96□□□□□ -1.29
PSMD6-204ENST00000467853 MARSP56192 900 aaKnown RBP6.96□□□□□ -1.29
PSMD6-204ENST00000467853 GRB10Q13322 594 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 RNPC3Q96LT9 517 aaKnown RBP6.96□□□□□ -1.29
PSMD6-204ENST00000467853 CCT8L2Q96SF2 557 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 ABCA3Q99758 1704 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 AIPL1Q9NZN9 384 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 GMNCA6NCL1 334 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 PGRMC1O00264 195 aaKnown RBP6.96□□□□□ -1.29
PSMD6-204ENST00000467853 SMTNP53814 917 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 PPP4CP60510 307 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 POLR2FP61218 127 aaKnown RBP6.96□□□□□ -1.29
PSMD6-204ENST00000467853 DYMQ7RTS9 669 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 ACTRT1Q8TDG2 376 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 SPAG5Q96R06 1193 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 PANK4Q9NVE7 773 aa6.96□□□□□ -1.29
PSMD6-204ENST00000467853 CCDC88AQ3V6T2 1871 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 SCN7AQ01118 1682 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 COL1A1P02452 1464 aaPredicted RBP6.96□□□□□ -1.3
PSMD6-204ENST00000467853 LOC102724428A0A0B4J2F2 783 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 A0A0G2JS52 829 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 GFPT2O94808 682 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 USP17L8P0C7I0 530 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 GUCY2FP51841 1108 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 SIK1P57059 783 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 ACTN3Q08043 901 aaPredicted RBP6.96□□□□□ -1.3
PSMD6-204ENST00000467853 KCTD16Q68DU8 428 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 LRRC55Q6ZSA7 311 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 HOOK3Q86VS8 718 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 ANKRD13CQ8N6S4 541 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 NEDD1Q8NHV4 660 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 CASKIN2Q8WXE0 1202 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 TBC1D5Q92609 795 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 MTMR8Q96EF0 704 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 CCDC114Q96M63 670 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 VCPKMTQ9H867 229 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 NLRC4Q9NPP4 1024 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 IL17RBQ9NRM6 502 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 INTUQ9ULD6 942 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 KRT18P05783 430 aaKnown RBP6.96□□□□□ -1.3
PSMD6-204ENST00000467853 GLI1P08151 1106 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 CCDC172P0C7W6 258 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 GBP1P32455 592 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 CTNNA1P35221 906 aaKnown RBP6.96□□□□□ -1.3
PSMD6-204ENST00000467853 EHHADHQ08426 723 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 TMEM119Q4V9L6 283 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 ASPRV1Q53RT3 343 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 MYCBPAPQ8TBZ2 947 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 DDX12PQ92771 950 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 MTMR9Q96QG7 549 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 MXD3Q9BW11 206 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 RAB17Q9H0T7 212 aa6.96□□□□□ -1.3
PSMD6-204ENST00000467853 STMN4Q9H169 189 aaPredicted RBP6.96□□□□□ -1.3
PSMD6-204ENST00000467853 ZNF233A6NK53 670 aa6.95□□□□□ -1.3
PSMD6-204ENST00000467853 USP11P51784 963 aa6.95□□□□□ -1.3
PSMD6-204ENST00000467853 MRPL12P52815 198 aaKnown RBP6.95□□□□□ -1.3
PSMD6-204ENST00000467853 EDRF1Q3B7T1 1238 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms