RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CDK5RAP2Q96SN8 1893 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 CARNS1A5YM72 827 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 ACTN1P12814 892 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 NPR3P17342 541 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 GTF2F1P35269 517 aaKnown RBP eCLIP6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 RRP1P56182 461 aaKnown RBP6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 GJA9P57773 515 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 FKBP5Q13451 457 aaPredicted RBP6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 PTPROQ16827 1216 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 CWF19L1Q69YN2 538 aaKnown RBP6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 PHLDB3Q6NSJ2 640 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 PCSK9Q8NBP7 692 aaKnown RBP6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 SMRP1Q8NCR6 262 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 IRF7Q92985 503 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 GMCL1Q96IK5 515 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 PHF7Q9BWX1 381 aaPredicted RBP6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 DNMT3LQ9UJW3 386 aa6.65□□□□□ -1.34
SBDSP1-204ENST00000453858 CACNA1IQ9P0X4 2223 aa6.65□□□□□ -1.35
SBDSP1-204ENST00000453858 ATMQ13315 3056 aa6.65□□□□□ -1.35
SBDSP1-204ENST00000453858 C1QTNF9BB2RNN3 333 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 H3BM21 787 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 CHL1O00533 1208 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 LINC01565O15544 149 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 PLIN1O60240 522 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 BAIAP3O94812 1187 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 SNAI1O95863 264 aaPredicted RBP6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 F11P03951 625 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 HOXB7P09629 217 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 C1QTNF9P0C862 333 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 PLA2G4AP47712 749 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 WDR5P61964 334 aaKnown RBP6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 DEFB103AP81534 67 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 COASYQ13057 564 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 LBRQ14739 615 aaKnown RBP6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 SHROOM1Q2M3G4 852 aaPredicted RBP6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 ZNF792Q3KQV3 632 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 EPC2Q52LR7 807 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 TBCELQ5QJ74 424 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 UBE3BQ7Z3V4 1068 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 DTWD2Q8NBA8 298 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 SHCBP1Q8NEM2 672 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 ZDHHC1Q8WTX9 485 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 MYO19Q96H55 970 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 C12orf42Q96LP6 360 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 AS3MTQ9HBK9 375 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 EGFL7Q9UHF1 273 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 USP3Q9Y6I4 520 aa6.64□□□□□ -1.35
SBDSP1-204ENST00000453858 FBN3Q75N90 2809 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 ANKRD18BA2A2Z9 1011 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 FAM181BA6NEQ2 426 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 FRAT2O75474 233 aaPredicted RBP6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 ERCC3P19447 782 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 AOC1P19801 751 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 RFC2P35250 354 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 FOXO4P98177 505 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 LMNB2Q03252 620 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 ITGA7Q13683 1181 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 GCKRQ14397 625 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 RTN1Q16799 776 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 TCTN1Q2MV58 587 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 ZSCAN29Q8IWY8 852 aaPredicted RBP6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 UBALD2Q8IYN6 164 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 ALDH16A1Q8IZ83 802 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 GPR161Q8N6U8 529 aaKnown RBP6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 SUSD6Q92537 303 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 RPGRIP1Q96KN7 1286 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 BBC3Q96PG8 261 aaPredicted RBP6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 SEZ6LQ9BYH1 1024 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 SLC5A4Q9NY91 659 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 ZNFX1Q9P2E3 1918 aaKnown RBP6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 DIS3Q9Y2L1 958 aaKnown RBP6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 FLNCQ14315 2725 aa6.63□□□□□ -1.35
SBDSP1-204ENST00000453858 NEURL1BA8MQ27 555 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 SLC30A4O14863 429 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 LGR5O75473 907 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 C6orf222P0C671 652 aaPredicted RBP6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 IQCF3P0C7M6 154 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 CYP2C9P11712 490 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 RHOQP17081 205 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 PHKA2P46019 1235 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 HTRA4P83105 476 aaPredicted RBP6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 ZNF200P98182 395 aaPredicted RBP6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 GPM6BQ13491 265 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 CWF19L2Q2TBE0 894 aaKnown RBP6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 CC2D1BQ5T0F9 858 aaKnown RBP6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 N4BP2L1Q5TBK1 243 aaPredicted RBP6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 C16orf46Q6P387 395 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 CXCL17Q6UXB2 119 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 PGBD3Q8N328 593 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 KREMEN2Q8NCW0 462 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 PHACTR1Q9C0D0 580 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 SPATC1LQ9H0A9 340 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 ALDH8A1Q9H2A2 487 aaPredicted RBP6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 SMOC2Q9H3U7 446 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 NEUROD4Q9HD90 331 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 FAM184BQ9ULE4 1060 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 USP15Q9Y4E8 981 aaPredicted RBP6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 ATG2AQ2TAZ0 1938 aa6.62□□□□□ -1.35
SBDSP1-204ENST00000453858 ASTN1O14525 1302 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 KIF16BQ96L93 1317 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms