RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RRP12Q5JTH9 1297 aaKnown RBP8.72□□□□□ -1.01
BRCC3-208ENST00000453705 ZBTB46Q86UZ6 589 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 ANKRD49Q8WVL7 239 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 ZNF75CPQ92670 426 aaPredicted RBP8.72□□□□□ -1.01
BRCC3-208ENST00000453705 GJA10Q969M2 543 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 SLC13A1Q9BZW2 595 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 A0A0D9SFI3 127 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 A0A1B0GUL7 405 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 SMAD7O15105 426 aaKnown RBP8.71□□□□□ -1.01
BRCC3-208ENST00000453705 MUTP22033 750 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 PMLP29590 882 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 PDE4BQ07343 736 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 CREB3L3Q68CJ9 461 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 TRIM68Q6AZZ1 485 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 ARHGAP27Q6ZUM4 889 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 ATCAYQ86WG3 371 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 TDRD7Q8NHU6 1098 aaKnown RBP8.71□□□□□ -1.01
BRCC3-208ENST00000453705 KLHDC4Q8TBB5 520 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 RASGRP4Q8TDF6 673 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 TNPO1Q92973 898 aaKnown RBP8.71□□□□□ -1.01
BRCC3-208ENST00000453705 THAP11Q96EK4 314 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 SLC39A3Q9BRY0 314 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 FSD1Q9BTV5 496 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 DNAI2Q9GZS0 605 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 SAP130Q9H0E3 1048 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 CAAP1Q9H8G2 361 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 PAG1Q9NWQ8 432 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 NARFQ9UHQ1 456 aa8.71□□□□□ -1.01
BRCC3-208ENST00000453705 RBM8AQ9Y5S9 174 aaKnown RBP8.71□□□□□ -1.01
BRCC3-208ENST00000453705 NDUFB5O43674 189 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 SLC3A2P08195 630 aaKnown RBP8.71□□□□□ -1.02
BRCC3-208ENST00000453705 PDE6CP51160 858 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 MPP1Q00013 466 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 PTH1RQ03431 593 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 PLA2G4EQ3MJ16 856 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 LRRC24Q50LG9 513 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 KCNV1Q6PIU1 500 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 RUFY3Q7L099 469 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 ENOSF1Q7L5Y1 443 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 ALG1Q9BT22 464 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 RGS17Q9UGC6 210 aaPredicted RBP8.71□□□□□ -1.02
BRCC3-208ENST00000453705 TRHDEQ9UKU6 1024 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 BLOC1S6Q9UL45 172 aa8.71□□□□□ -1.02
BRCC3-208ENST00000453705 FOCADQ5VW36 1801 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 ECM29Q5VYK3 1845 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 COL4A1P02462 1669 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 CCDC196A0A1B0GTZ2 297 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 TTLL13PA6NNM8 815 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 RNF113AO15541 343 aaKnown RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 FZD6O60353 706 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 KLHL41O60662 606 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 ZKSCAN1P17029 563 aaPredicted RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 ITGA6P23229 1130 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 NEK4P51957 841 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 COL9A2Q14055 689 aaPredicted RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 HLTFQ14527 1009 aaKnown RBP eCLIP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 TMCO3Q6UWJ1 677 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 GALNT13Q8IUC8 556 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 SLC44A2Q8IWA5 706 aaPredicted RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 PPM1NQ8N819 430 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 LINC00116Q8NCU8 138 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 GPATCH1Q9BRR8 931 aaKnown RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 SIL1Q9H173 461 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 RABEP2Q9H5N1 569 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 NLRC4Q9NPP4 1024 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 LIMCH1Q9UPQ0 1083 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 ZNF804BA4D1E1 1349 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 M0R3H8 397 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 PLOD3O60568 738 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 ABLIM3O94929 683 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 LETM1O95202 739 aaPredicted RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 PDE8BO95263 885 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 DNTTP04053 509 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 ATP1A3P13637 1013 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 PRKAR2AP13861 404 aaKnown RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 CD46P15529 392 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 NRLP54845 237 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 EVCP57679 992 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 SUSD4Q5VX71 490 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 ZSCAN25Q6NSZ9 544 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 CWC27Q6UX04 472 aaKnown RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 MFSD6Q6ZSS7 791 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 SLC41A1Q8IVJ1 513 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 MIGA1Q8NAN2 632 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 PPP1R14CQ8TAE6 165 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 NUP133Q8WUM0 1156 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 C17orf50Q8WW18 174 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 LPIN2Q92539 896 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 NAA15Q9BXJ9 866 aaKnown RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 NYXQ9GZU5 481 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 BOLA2Q9H3K6 86 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 CCNL1Q9UK58 526 aaPredicted RBP8.7□□□□□ -1.02
BRCC3-208ENST00000453705 PPT2Q9UMR5 302 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 MAPK8IP1Q9UQF2 711 aa8.7□□□□□ -1.02
BRCC3-208ENST00000453705 FAM25EA8MYX2 175 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 TISP43B9A030 160 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 B9A039 149 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 GZMAP12544 262 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 UBE3CQ15386 1083 aa8.69□□□□□ -1.02
BRCC3-208ENST00000453705 ALX1Q15699 326 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms