RNA–Protein interactions for RNA: ENST00000444973.5

NEK6-209, Transcript of NIMA related kinase 6, human

TSL 5

Gene NEK6, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-209	ENST00000444973	INPP4A	Q96PE3	977 aa	Predicted RBP	32.69	■■■□□ 2.82
NEK6-209	ENST00000444973	MYL10	Q9BUA6	226 aa		32.69	■■■□□ 2.82
NEK6-209	ENST00000444973	FRMPD4	Q14CM0	1322 aa		32.69	■■■□□ 2.82
NEK6-209	ENST00000444973	LINC01553	A4QN01	128 aa		32.68	■■■□□ 2.82
NEK6-209	ENST00000444973	RSPH10B2	B2RC85	870 aa		32.68	■■■□□ 2.82
NEK6-209	ENST00000444973	NOP56	O00567	594 aa	Known RBP	32.68	■■■□□ 2.82
NEK6-209	ENST00000444973	RSPH10B	P0C881	870 aa		32.68	■■■□□ 2.82
NEK6-209	ENST00000444973	SEMA3F	Q13275	785 aa		32.68	■■■□□ 2.82
NEK6-209	ENST00000444973	GNPTAB	Q3T906	1256 aa		32.68	■■■□□ 2.82
NEK6-209	ENST00000444973	DBF4B	Q8NFT6	615 aa		32.68	■■■□□ 2.82
NEK6-209	ENST00000444973	COG5	Q9UP83	839 aa		32.68	■■■□□ 2.82
NEK6-209	ENST00000444973	IRX6	P78412	446 aa	Predicted RBP	32.67	■■■□□ 2.82
NEK6-209	ENST00000444973	CYFIP1	Q7L576	1253 aa		32.67	■■■□□ 2.82
NEK6-209	ENST00000444973	TGS1	Q96RS0	853 aa	Known RBP	32.67	■■■□□ 2.82
NEK6-209	ENST00000444973	SUGCT	Q9HAC7	445 aa		32.67	■■■□□ 2.82
NEK6-209	ENST00000444973	TELO2	Q9Y4R8	837 aa		32.67	■■■□□ 2.82
NEK6-209	ENST00000444973	EMSY	Q7Z589	1322 aa		32.67	■■■□□ 2.82
NEK6-209	ENST00000444973	SPATA31C2	B4DYI2	1134 aa		32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	TREH	O43280	583 aa		32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	HOXC8	P31273	242 aa		32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	ICAM3	P32942	547 aa		32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	TRIM50	Q86XT4	487 aa		32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	MAP4K1	Q92918	833 aa		32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	HLA-C	Q95604	372 aa		32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	RNPEP	Q9H4A4	650 aa		32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	RAPGEFL1	Q9UHV5	662 aa		32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	RBM8A	Q9Y5S9	174 aa	Known RBP	32.66	■■■□□ 2.82
NEK6-209	ENST00000444973	CTSH	P09668	335 aa		32.65	■■■□□ 2.82
NEK6-209	ENST00000444973	ERVK-21	P61565	698 aa		32.65	■■■□□ 2.82
NEK6-209	ENST00000444973	USP17L6P	Q6QN14	398 aa		32.65	■■■□□ 2.82
NEK6-209	ENST00000444973	METTL7B	Q6UX53	244 aa		32.65	■■■□□ 2.82
NEK6-209	ENST00000444973	ZNF654	Q8IZM8	581 aa		32.65	■■■□□ 2.82
NEK6-209	ENST00000444973	MYOCD	Q8IZQ8	938 aa		32.65	■■■□□ 2.82
NEK6-209	ENST00000444973	LY9	Q9HBG7	655 aa		32.65	■■■□□ 2.82
NEK6-209	ENST00000444973	FIBP	O43427	364 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	NCOR1	O75376	2440 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	STAM2	O75886	525 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	SP4	Q02446	784 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	MKRN4P	Q13434	485 aa	Predicted RBP	32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	NEDD9	Q14511	834 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	CTCFL	Q8NI51	663 aa	Predicted RBP	32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	SMARCC2	Q8TAQ2	1214 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	RRP36	Q96EU6	259 aa	Known RBP	32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	GPR20	Q99678	358 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	SPZ1	Q9BXG8	430 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	OSBPL7	Q9BZF2	842 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	DOCK5	Q9H7D0	1870 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	SETD4	Q9NVD3	440 aa		32.64	■■■□□ 2.82
NEK6-209	ENST00000444973	PLEKHG4	Q58EX7	1191 aa		32.63	■■■□□ 2.81
NEK6-209	ENST00000444973	USP26	Q9BXU7	913 aa		32.63	■■■□□ 2.81
NEK6-209	ENST00000444973	AMH	P03971	560 aa		32.62	■■■□□ 2.81
NEK6-209	ENST00000444973	UTP14C	Q5TAP6	766 aa	Known RBP	32.62	■■■□□ 2.81
NEK6-209	ENST00000444973	CUL5	Q93034	780 aa		32.62	■■■□□ 2.81
NEK6-209	ENST00000444973	DDAH1	O94760	285 aa		32.61	■■■□□ 2.81
NEK6-209	ENST00000444973	KIF5B	P33176	963 aa		32.61	■■■□□ 2.81
NEK6-209	ENST00000444973	MAP3K14	Q99558	947 aa		32.61	■■■□□ 2.81
NEK6-209	ENST00000444973	C17orf80	Q9BSJ5	609 aa		32.61	■■■□□ 2.81
NEK6-209	ENST00000444973	LMCD1	Q9NZU5	365 aa		32.61	■■■□□ 2.81
NEK6-209	ENST00000444973	INSL6	Q9Y581	213 aa		32.61	■■■□□ 2.81
NEK6-209	ENST00000444973	MICAL3	Q7RTP6	2002 aa		32.61	■■■□□ 2.81
NEK6-209	ENST00000444973	MEIS2	O14770	477 aa		32.6	■■■□□ 2.81
NEK6-209	ENST00000444973	PRC1	O43663	620 aa		32.6	■■■□□ 2.81
NEK6-209	ENST00000444973	PLEKHA8P1	O95397	391 aa		32.6	■■■□□ 2.81
NEK6-209	ENST00000444973	COL9A3	Q14050	684 aa	Predicted RBP	32.6	■■■□□ 2.81
NEK6-209	ENST00000444973	PCNX4	Q63HM2	1172 aa		32.6	■■■□□ 2.81
NEK6-209	ENST00000444973	CASC1	Q6TDU7	716 aa		32.6	■■■□□ 2.81
NEK6-209	ENST00000444973	SEC63	Q9UGP8	760 aa	Known RBP	32.6	■■■□□ 2.81
NEK6-209	ENST00000444973	SI	P14410	1827 aa		32.6	■■■□□ 2.81
NEK6-209	ENST00000444973	CMTR1	Q8N1G2	835 aa	Known RBP	32.59	■■■□□ 2.81
NEK6-209	ENST00000444973	SEPT8	Q92599	483 aa		32.59	■■■□□ 2.81
NEK6-209	ENST00000444973	RXRA	P19793	462 aa		32.58	■■■□□ 2.81
NEK6-209	ENST00000444973	HTRA4	P83105	476 aa	Predicted RBP	32.58	■■■□□ 2.81
NEK6-209	ENST00000444973	NFXL1	Q6ZNB6	911 aa		32.58	■■■□□ 2.81
NEK6-209	ENST00000444973	SRBD1	Q8N5C6	995 aa	Known RBP	32.58	■■■□□ 2.81
NEK6-209	ENST00000444973	ZNF215	Q9UL58	517 aa	Predicted RBP	32.58	■■■□□ 2.81
NEK6-209	ENST00000444973	PIK3CD	O00329	1044 aa		32.57	■■■□□ 2.8
NEK6-209	ENST00000444973	ARHGAP4	P98171	946 aa		32.57	■■■□□ 2.8
NEK6-209	ENST00000444973	RAB11FIP4	Q86YS3	637 aa		32.57	■■■□□ 2.8
NEK6-209	ENST00000444973	FBXO22	Q8NEZ5	403 aa		32.57	■■■□□ 2.8
NEK6-209	ENST00000444973	LMBR1	Q8WVP7	490 aa		32.57	■■■□□ 2.8
NEK6-209	ENST00000444973	BDP1	A6H8Y1	2624 aa		32.57	■■■□□ 2.8
NEK6-209	ENST00000444973	SH2B2	O14492	632 aa	Predicted RBP	32.56	■■■□□ 2.8
NEK6-209	ENST00000444973	CAND2	O75155	1236 aa		32.56	■■■□□ 2.8
NEK6-209	ENST00000444973	GNAT1	P11488	350 aa		32.56	■■■□□ 2.8
NEK6-209	ENST00000444973	SENP7	Q9BQF6	1050 aa		32.56	■■■□□ 2.8
NEK6-209	ENST00000444973	CCDC69	A6NI79	296 aa		32.55	■■■□□ 2.8
NEK6-209	ENST00000444973	UPP2	O95045	317 aa		32.55	■■■□□ 2.8
NEK6-209	ENST00000444973	SMARCA1	P28370	1054 aa		32.55	■■■□□ 2.8
NEK6-209	ENST00000444973	XRRA1	Q6P2D8	792 aa		32.55	■■■□□ 2.8
NEK6-209	ENST00000444973	NLRX1	Q86UT6	975 aa		32.55	■■■□□ 2.8
NEK6-209	ENST00000444973	SP7	Q8TDD2	431 aa	Predicted RBP	32.55	■■■□□ 2.8
NEK6-209	ENST00000444973	LZTS2	Q9BRK4	669 aa		32.55	■■■□□ 2.8
NEK6-209	ENST00000444973	hCG_1642624	A0A1W2PR95	340 aa		32.54	■■■□□ 2.8
NEK6-209	ENST00000444973	MCM5	P33992	734 aa		32.54	■■■□□ 2.8
NEK6-209	ENST00000444973	ADAM17	P78536	824 aa		32.54	■■■□□ 2.8
NEK6-209	ENST00000444973	YME1L1	Q96TA2	773 aa		32.54	■■■□□ 2.8
NEK6-209	ENST00000444973	LSG1	Q9H089	658 aa	Known RBP	32.54	■■■□□ 2.8
NEK6-209	ENST00000444973	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	32.53	■■■□□ 2.8
NEK6-209	ENST00000444973	ATP9A	O75110	1047 aa		32.53	■■■□□ 2.8
NEK6-209	ENST00000444973	GNAQ	P50148	359 aa		32.53	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms