RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 NLRX1Q86UT6 975 aa24.21■■□□□ 1.47
VSX1-206ENST00000444511 SERINC5Q86VE9 423 aa24.21■■□□□ 1.47
VSX1-206ENST00000444511 MICALL1Q8N3F8 863 aa24.21■■□□□ 1.47
VSX1-206ENST00000444511 CCDC82Q8N4S0 544 aa24.21■■□□□ 1.47
VSX1-206ENST00000444511 ZBED2Q9BTP6 218 aa24.21■■□□□ 1.47
VSX1-206ENST00000444511 PSTPIP2Q9H939 334 aa24.21■■□□□ 1.47
VSX1-206ENST00000444511 ABHD14A-ACY1A0A1B0GW23 586 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 SMIM10L2AP0DMW4 78 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 SMIM10L2BP0DMW5 78 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 THPOP40225 353 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 TRAF7Q6Q0C0 670 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 SYNE3Q6ZMZ3 975 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 SKAP1Q86WV1 359 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 MICU3Q86XE3 530 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 FANCBQ8NB91 859 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 ATXN2LQ8WWM7 1075 aaKnown RBP24.2■■□□□ 1.46
VSX1-206ENST00000444511 ATP6V0A1Q93050 837 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 GPR20Q99678 358 aa24.2■■□□□ 1.46
VSX1-206ENST00000444511 hCG_1642624A0A1W2PR95 340 aa24.19■■□□□ 1.46
VSX1-206ENST00000444511 EFCAB14O75071 495 aa24.19■■□□□ 1.46
VSX1-206ENST00000444511 SP4Q02446 784 aa24.19■■□□□ 1.46
VSX1-206ENST00000444511 TAP1Q03518 808 aa24.19■■□□□ 1.46
VSX1-206ENST00000444511 IKBKEQ14164 716 aa24.19■■□□□ 1.46
VSX1-206ENST00000444511 TMTC3Q6ZXV5 915 aa24.19■■□□□ 1.46
VSX1-206ENST00000444511 SGMS1Q86VZ5 419 aa24.19■■□□□ 1.46
VSX1-206ENST00000444511 ARNTL2Q8WYA1 636 aa24.19■■□□□ 1.46
VSX1-206ENST00000444511 SENP7Q9BQF6 1050 aa24.19■■□□□ 1.46
VSX1-206ENST00000444511 ZNF215Q9UL58 517 aaPredicted RBP24.19■■□□□ 1.46
VSX1-206ENST00000444511 TRIP12Q14669 1992 aaPredicted RBP24.19■■□□□ 1.46
VSX1-206ENST00000444511 EMSYQ7Z589 1322 aa24.18■■□□□ 1.46
VSX1-206ENST00000444511 VCANP13611 3396 aa24.18■■□□□ 1.46
VSX1-206ENST00000444511 RSPH10B2B2RC85 870 aa24.18■■□□□ 1.46
VSX1-206ENST00000444511 RFXAPO00287 272 aa24.18■■□□□ 1.46
VSX1-206ENST00000444511 GTPBP6O43824 516 aaPredicted RBP24.18■■□□□ 1.46
VSX1-206ENST00000444511 RSPH10BP0C881 870 aa24.18■■□□□ 1.46
VSX1-206ENST00000444511 DEFB103AP81534 67 aa24.18■■□□□ 1.46
VSX1-206ENST00000444511 TMCO2Q7Z6W1 182 aaPredicted RBP24.18■■□□□ 1.46
VSX1-206ENST00000444511 GIMAP8Q8ND71 665 aaPredicted RBP24.18■■□□□ 1.46
VSX1-206ENST00000444511 TET1Q8NFU7 2136 aa24.18■■□□□ 1.46
VSX1-206ENST00000444511 TSPYL2Q9H2G4 693 aaPredicted RBP24.18■■□□□ 1.46
VSX1-206ENST00000444511 RNPEPQ9H4A4 650 aa24.18■■□□□ 1.46
VSX1-206ENST00000444511 LGR5O75473 907 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 ARHGEF15O94989 841 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 GNAT1P11488 350 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 HOXC8P31273 242 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 MBTPS1Q14703 1052 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 TCTN1Q2MV58 587 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 UTP14CQ5TAP6 766 aaKnown RBP24.17■■□□□ 1.46
VSX1-206ENST00000444511 HEATR3Q7Z4Q2 680 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 TRIM50Q86XT4 487 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 CDHR1Q96JP9 859 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 NEK1Q96PY6 1258 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 MYO9BQ13459 2157 aa24.17■■□□□ 1.46
VSX1-206ENST00000444511 SPDYE3A6NKU9 549 aa24.16■■□□□ 1.46
VSX1-206ENST00000444511 TREHO43280 583 aa24.16■■□□□ 1.46
VSX1-206ENST00000444511 UBE2SQ16763 222 aa24.16■■□□□ 1.46
VSX1-206ENST00000444511 GPRASP2Q96D09 838 aa24.16■■□□□ 1.46
VSX1-206ENST00000444511 EPOPA6NHQ4 379 aa24.15■■□□□ 1.46
VSX1-206ENST00000444511 MRPS5P82675 430 aaKnown RBP24.15■■□□□ 1.46
VSX1-206ENST00000444511 APOA5Q6Q788 366 aa24.15■■□□□ 1.46
VSX1-206ENST00000444511 ASB2Q96Q27 587 aa24.15■■□□□ 1.46
VSX1-206ENST00000444511 SETD4Q9NVD3 440 aa24.15■■□□□ 1.46
VSX1-206ENST00000444511 RBM28Q9NW13 759 aaKnown RBP24.15■■□□□ 1.46
VSX1-206ENST00000444511 CHD7Q9P2D1 2997 aa24.15■■□□□ 1.46
VSX1-206ENST00000444511 TELO2Q9Y4R8 837 aa24.15■■□□□ 1.46
VSX1-206ENST00000444511 MTCH2Q9Y6C9 303 aa24.15■■□□□ 1.46
VSX1-206ENST00000444511 LCHNA4D1U4 455 aa24.14■■□□□ 1.45
VSX1-206ENST00000444511 GJB5O95377 273 aa24.14■■□□□ 1.45
VSX1-206ENST00000444511 POU3F3P20264 500 aaPredicted RBP24.14■■□□□ 1.45
VSX1-206ENST00000444511 SKIV2LQ15477 1246 aaKnown RBP24.14■■□□□ 1.45
VSX1-206ENST00000444511 DBF4BQ8NFT6 615 aa24.14■■□□□ 1.45
VSX1-206ENST00000444511 RAD9AQ99638 391 aa24.14■■□□□ 1.45
VSX1-206ENST00000444511 EHMT1Q9H9B1 1298 aa24.14■■□□□ 1.45
VSX1-206ENST00000444511 PCDHA6Q9UN73 950 aa24.14■■□□□ 1.45
VSX1-206ENST00000444511 PCDHA8Q9Y5H6 950 aa24.14■■□□□ 1.45
VSX1-206ENST00000444511 CAND2O75155 1236 aa24.13■■□□□ 1.45
VSX1-206ENST00000444511 CDC45O75419 566 aa24.13■■□□□ 1.45
VSX1-206ENST00000444511 CTSHP09668 335 aa24.13■■□□□ 1.45
VSX1-206ENST00000444511 ITGB5P18084 799 aa24.13■■□□□ 1.45
VSX1-206ENST00000444511 TCF7P36402 384 aaPredicted RBP24.13■■□□□ 1.45
VSX1-206ENST00000444511 ARHGAP4P98171 946 aa24.13■■□□□ 1.45
VSX1-206ENST00000444511 MTMR1Q13613 665 aa24.13■■□□□ 1.45
VSX1-206ENST00000444511 FAM117BQ6P1L5 589 aa24.13■■□□□ 1.45
VSX1-206ENST00000444511 DHX32Q7L7V1 743 aaKnown RBP24.13■■□□□ 1.45
VSX1-206ENST00000444511 IL27Q8NEV9 243 aa24.13■■□□□ 1.45
VSX1-206ENST00000444511 TCEANC2Q96MN5 208 aa24.13■■□□□ 1.45
VSX1-206ENST00000444511 ZBTB43O43298 467 aa24.12■■□□□ 1.45
VSX1-206ENST00000444511 ATP9AO75110 1047 aa24.12■■□□□ 1.45
VSX1-206ENST00000444511 KCNA2P16389 499 aa24.12■■□□□ 1.45
VSX1-206ENST00000444511 EXOSC10Q01780 885 aaKnown RBP24.12■■□□□ 1.45
VSX1-206ENST00000444511 RTN1Q16799 776 aa24.12■■□□□ 1.45
VSX1-206ENST00000444511 SPRED2Q7Z698 418 aa24.12■■□□□ 1.45
VSX1-206ENST00000444511 PKD2L1Q9P0L9 805 aa24.12■■□□□ 1.45
VSX1-206ENST00000444511 UBIAD1Q9Y5Z9 338 aa24.12■■□□□ 1.45
VSX1-206ENST00000444511 CNTNAP5Q8WYK1 1306 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 RBAK-RBAKDNI3L0D1 243 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 AMHP03971 560 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 NAPAP54920 295 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 GRB10Q13322 594 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 KRT32Q14532 448 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms