RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 SPDYE3A6NKU9 549 aa13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 CUTAO60888 179 aa13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 USP11P51784 963 aa13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 ADGRE1Q14246 886 aa13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 AXDND1Q5T1B0 1012 aaPredicted RBP13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 PPP4R3AQ6IN85 833 aa13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 USP17L6PQ6QN14 398 aa13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 KRI1Q8N9T8 703 aaKnown RBP13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 CRYGNQ8WXF5 182 aa13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 CLEC4DQ8WXI8 215 aa13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 TMEM39AQ9NV64 488 aa13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 SRPRBQ9Y5M8 271 aaKnown RBP13.29□□□□□ -0.28
AC009404.1-202ENST00000439955 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 COBLO75128 1261 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 PGK1P00558 417 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 ALAS1P13196 640 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 CMA1P23946 247 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 COPB2P35606 906 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 SREBF1P36956 1147 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 PRPHP41219 470 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 TMEM132BQ14DG7 1078 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 C1orf53Q5VUE5 145 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 OLFML2BQ68BL8 750 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 CPXCR1Q8N123 301 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.289e-6■■■■■ 27.7
AC009404.1-202ENST00000439955 MOV10L1Q9BXT6 1211 aaKnown RBP13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 PBX4Q9BYU1 374 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 XPNPEP3Q9NQH7 507 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 FBXO2Q9UK22 296 aaPredicted RBP13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 MYH7BA7E2Y1 1941 aa13.28□□□□□ -0.28
AC009404.1-202ENST00000439955 CYP3A7-CYP3A51PA0A087WV96 503 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 FAM237AA0A1B0GTK4 181 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 WNT7AO00755 349 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 NEMFO60524 1076 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 CFBP00751 764 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 CYP3A4P08684 503 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 CYP3A7P24462 503 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 MCM7P33993 719 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 PTGDRQ13258 359 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 ZNF174Q15697 407 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 LETM2Q2VYF4 491 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 SNRNP48Q6IEG0 339 aaKnown RBP13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 RIOX2Q8IUF8 465 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 C4orf32Q8N8J7 132 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 CHST13Q8NET6 341 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 MRPS27Q92552 414 aaKnown RBP13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 MBOAT7Q96N66 472 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 TRERF1Q96PN7 1200 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 RNF146Q9NTX7 359 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 FBXO40Q9UH90 709 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 PHF24Q9UPV7 400 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 SMCHD1A6NHR9 2005 aa13.27□□□□□ -0.29
AC009404.1-202ENST00000439955 NFIBO00712 420 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 CCNT1O60563 726 aaKnown RBP13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 TAL1P17542 331 aaPredicted RBP13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 ERCC3P19447 782 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 MARCKSP29966 332 aaPredicted RBP13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 CIITAP33076 1130 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 STAT3P40763 770 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 ARHGAP4P98171 946 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 FAAP100Q0VG06 881 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 RESP18Q5W5W9 173 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 CCDC73Q6ZRK6 1079 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 LENG1Q96BZ8 264 aaPredicted RBP13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 ACAD9Q9H845 621 aa13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 DDX19AQ9NUU7 478 aaKnown RBP13.26□□□□□ -0.29
AC009404.1-202ENST00000439955 A0A1W2PQ45 241 aaPredicted RBP13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 A0A1W2PQY0 241 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 EDIL3O43854 480 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 SLC25A27O95847 323 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 OR52Z1P0C646 297 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 HOXA13P31271 388 aaPredicted RBP13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 LONP1P36776 959 aaKnown RBP13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 TFF2Q03403 129 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 FAM160A1Q05DH4 1040 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 PLS1Q14651 629 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 MUM1L1Q5H9M0 696 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 C16orf59Q7L2K0 433 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 MICALL1Q8N3F8 863 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 FSIP1Q8NA03 581 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 C1QTNF1Q9BXJ1 281 aa13.25□□□□□ -0.29
AC009404.1-202ENST00000439955 TBX3O15119 743 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 ACRP10323 421 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 RARBP10826 455 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 CCDC183Q5T5S1 534 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 SHC4Q6S5L8 630 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 RNF207Q6ZRF8 634 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 RNF180Q86T96 592 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 NCAPG2Q86XI2 1143 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 SHCBP1Q8NEM2 672 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 SYTL5Q8TDW5 730 aaPredicted RBP13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 MAML3Q96JK9 1138 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 MTMR9Q96QG7 549 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 SPATC1LQ9H0A9 340 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 EPHX3Q9H6B9 360 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms