RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ATP6V0A1Q93050 837 aa21.2■□□□□ 0.98
AC004540.1-201ENST00000439120 CDHR1Q96JP9 859 aa21.2■□□□□ 0.98
AC004540.1-201ENST00000439120 EHMT1Q9H9B1 1298 aa21.2■□□□□ 0.98
AC004540.1-201ENST00000439120 RBM28Q9NW13 759 aaKnown RBP21.2■□□□□ 0.98
AC004540.1-201ENST00000439120 SMIM10L2AP0DMW4 78 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 SMIM10L2BP0DMW5 78 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 THPOP40225 353 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 FGD1P98174 961 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 ADGRE1Q14246 886 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 CCDC85BQ15834 202 aaPredicted RBP21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 ZNF618Q5T7W0 954 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 APOA5Q6Q788 366 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 GPR20Q99678 358 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 SENP7Q9BQF6 1050 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 ZBED2Q9BTP6 218 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 BCAS3Q9H6U6 928 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 TET1Q8NFU7 2136 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 CHD9Q3L8U1 2897 aa21.19■□□□□ 0.98
AC004540.1-201ENST00000439120 ZBTB43O43298 467 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 TLL1O43897 1013 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 NBNO60934 754 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 EFCAB14O75071 495 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 GNAT1P11488 350 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 WDR5P61964 334 aaKnown RBP21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 SEMA3FQ13275 785 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 UBE2SQ16763 222 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 UTP14CQ5TAP6 766 aaKnown RBP21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 DHX32Q7L7V1 743 aaKnown RBP21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 SERINC5Q86VE9 423 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 SYMPKQ92797 1274 aaKnown RBP21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 GPRASP2Q96D09 838 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 TCEANC2Q96MN5 208 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 MYO9BQ13459 2157 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 EMSYQ7Z589 1322 aa21.18■□□□□ 0.98
AC004540.1-201ENST00000439120 ABHD14A-ACY1A0A1B0GW23 586 aa21.17■□□□□ 0.98
AC004540.1-201ENST00000439120 CXCL10P02778 98 aa21.17■□□□□ 0.98
AC004540.1-201ENST00000439120 IKBKEQ14164 716 aa21.17■□□□□ 0.98
AC004540.1-201ENST00000439120 RTN1Q16799 776 aa21.17■□□□□ 0.98
AC004540.1-201ENST00000439120 TRIM71Q2Q1W2 868 aaKnown RBP21.17■□□□□ 0.98
AC004540.1-201ENST00000439120 MICALL1Q8N3F8 863 aa21.17■□□□□ 0.98
AC004540.1-201ENST00000439120 WNT8BQ93098 351 aa21.17■□□□□ 0.98
AC004540.1-201ENST00000439120 CERS4Q9HA82 394 aa21.17■□□□□ 0.98
AC004540.1-201ENST00000439120 NAP1L2Q9ULW6 460 aaPredicted RBP21.17■□□□□ 0.98
AC004540.1-201ENST00000439120 RSPH10B2B2RC85 870 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 HMGB1P09429 215 aaKnown RBP21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 RSPH10BP0C881 870 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 NAPAP54920 295 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 MTMR1Q13613 665 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 HIC1Q14526 733 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 GPNMBQ14956 572 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 TRIM50Q86XT4 487 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 CCDC136Q96JN2 1154 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 TSPYL2Q9H2G4 693 aaPredicted RBP21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 PCDHA6Q9UN73 950 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 PCDHA8Q9Y5H6 950 aa21.16■□□□□ 0.98
AC004540.1-201ENST00000439120 CNTNAP5Q8WYK1 1306 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 GOLGA8AA7E2F4 631 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 GOLGA8BA8MQT2 603 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 TREHO43280 583 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 GTPBP6O43824 516 aaPredicted RBP21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 LGR5O75473 907 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 EXOSC10Q01780 885 aaKnown RBP21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 ADCK5Q3MIX3 580 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 TSGA10IPQ3SY00 556 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 RNPEPQ9H4A4 650 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 SETD4Q9NVD3 440 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 PKD2L1Q9P0L9 805 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 THEGQ9P2T0 379 aa21.15■□□□□ 0.98
AC004540.1-201ENST00000439120 KLF18A0A0U1RQI7 1052 aa21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 TCF7P36402 384 aaPredicted RBP21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 DEFB103AP81534 67 aa21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 TJAP1Q5JTD0 557 aa21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 WWC2Q6AWC2 1192 aa21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 TRAF7Q6Q0C0 670 aa21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 RASEFQ8IZ41 740 aa21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 ARNTL2Q8WYA1 636 aa21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 PRDM6Q9NQX0 595 aa21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 BRPF3Q9ULD4 1205 aa21.14■□□□□ 0.97
AC004540.1-201ENST00000439120 CAND2O75155 1236 aa21.13■□□□□ 0.97
AC004540.1-201ENST00000439120 CTSHP09668 335 aa21.13■□□□□ 0.97
AC004540.1-201ENST00000439120 ITGB5P18084 799 aa21.13■□□□□ 0.97
AC004540.1-201ENST00000439120 HOXC8P31273 242 aa21.13■□□□□ 0.97
AC004540.1-201ENST00000439120 ARHGAP4P98171 946 aa21.13■□□□□ 0.97
AC004540.1-201ENST00000439120 TAP1Q03518 808 aa21.13■□□□□ 0.97
AC004540.1-201ENST00000439120 PPP1R18Q6NYC8 613 aa21.13■□□□□ 0.97
AC004540.1-201ENST00000439120 TMCO2Q7Z6W1 182 aaPredicted RBP21.13■□□□□ 0.97
AC004540.1-201ENST00000439120 PTPRSQ13332 1948 aa21.13■□□□□ 0.97
AC004540.1-201ENST00000439120 CHD7Q9P2D1 2997 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 hCG_1984214I3L0E3 225 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 MAFGO15525 162 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 ATP9AO75110 1047 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 KCNA2P16389 499 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 ADCY7P51828 1080 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 MBTPS1Q14703 1052 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 TEX2Q8IWB9 1127 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 ZNF713Q8N859 430 aaPredicted RBP21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 IL27Q8NEV9 243 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 ATXN2LQ8WWM7 1075 aaKnown RBP21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 SEPT1Q8WYJ6 367 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 GLG1Q92896 1179 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms