RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 FKBP9O95302 570 aa7.78□□□□□ -1.16
SPEN-202ENST00000438066 CT47B1P0C2W7 299 aaPredicted RBP7.78□□□□□ -1.16
SPEN-202ENST00000438066 AMPD1P23109 780 aa7.78□□□□□ -1.16
SPEN-202ENST00000438066 TMPOP42166 694 aaKnown RBP7.78□□□□□ -1.16
SPEN-202ENST00000438066 SCRN1Q12765 414 aa7.78□□□□□ -1.16
SPEN-202ENST00000438066 FKBP9P1Q75LS8 142 aa7.78□□□□□ -1.16
SPEN-202ENST00000438066 TPH2Q8IWU9 490 aa7.78□□□□□ -1.16
SPEN-202ENST00000438066 DCAF4Q8WV16 495 aa7.78□□□□□ -1.16
SPEN-202ENST00000438066 LUC7LQ9NQ29 371 aaKnown RBP7.78□□□□□ -1.16
SPEN-202ENST00000438066 KIF1AQ12756 1690 aa7.78□□□□□ -1.16
SPEN-202ENST00000438066 MAPK8IP3Q9UPT6 1336 aa7.77□□□□□ -1.16
SPEN-202ENST00000438066 TRPM3Q9HCF6 1732 aaPredicted RBP7.77□□□□□ -1.17
SPEN-202ENST00000438066 MEIS1O00470 390 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 LRRN2O75325 713 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 RFPL1O75677 317 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 F2P00734 622 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 MYBL2P10244 700 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 PDE6BP35913 854 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 LAPTM4AQ15012 233 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 RRS1Q15050 365 aaKnown RBP7.77□□□□□ -1.17
SPEN-202ENST00000438066 IGSF22Q8N9C0 903 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 EXOC6Q8TAG9 804 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 FBXL18Q96ME1 805 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 CAMKK2Q96RR4 588 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 ASPNQ9BXN1 380 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 PNNQ9H307 717 aaKnown RBP7.77□□□□□ -1.17
SPEN-202ENST00000438066 GSX1Q9H4S2 264 aaPredicted RBP7.77□□□□□ -1.17
SPEN-202ENST00000438066 PRDM16Q9HAZ2 1276 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 PCOLCE2Q9UKZ9 415 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 IL16Q14005 1332 aa7.77□□□□□ -1.17
SPEN-202ENST00000438066 NFAT5O94916 1531 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 VSTM5A8MXK1 200 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 CBX4O00257 560 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 GAS7O60861 476 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 SLITRK5O94991 958 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 IARSP41252 1262 aaKnown RBP7.76□□□□□ -1.17
SPEN-202ENST00000438066 DSG1Q02413 1049 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 SRSF11Q05519 484 aaKnown RBP7.76□□□□□ -1.17
SPEN-202ENST00000438066 ATP13A4Q4VNC1 1196 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 ZC3H7AQ8IWR0 971 aaKnown RBP7.76□□□□□ -1.17
SPEN-202ENST00000438066 PPIL6Q8IXY8 311 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 DTWD1Q8N5C7 304 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 SAMD3Q8N6K7 520 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 NGDNQ8NEJ9 315 aaKnown RBP7.76□□□□□ -1.17
SPEN-202ENST00000438066 RNF141Q8WVD5 230 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 ORAI3Q9BRQ5 295 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 PHF20Q9BVI0 1012 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 LGR6Q9HBX8 967 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 VTA1Q9NP79 307 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 MINPP1Q9UNW1 487 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 COQ6Q9Y2Z9 468 aa7.76□□□□□ -1.17
SPEN-202ENST00000438066 SHISA8B8ZZ34 492 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 TIAF1O95411 115 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 MT-CO1P00395 513 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 ITIH2P19823 946 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 CCND1P24385 295 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 PRKAR2BP31323 418 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 FDX2Q6P4F2 183 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 TMC3Q7Z5M5 1100 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 KIF18BQ86Y91 864 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 CBARPQ8N350 705 aaPredicted RBP7.75□□□□□ -1.17
SPEN-202ENST00000438066 C2CD4AQ8NCU7 369 aaPredicted RBP7.75□□□□□ -1.17
SPEN-202ENST00000438066 KREMEN2Q8NCW0 462 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 GPRC5CQ9NQ84 441 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 SF3B6Q9Y3B4 125 aaKnown RBP7.75□□□□□ -1.17
SPEN-202ENST00000438066 SBNO1A3KN83 1393 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 XIRP1Q702N8 1843 aaKnown RBP7.75□□□□□ -1.17
SPEN-202ENST00000438066 STRCQ7RTU9 1775 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 H0Y8X5 98 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 STXBP3O00186 592 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 SRGAP2CP0DJJ0 459 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 RAB6AP20340 208 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 ETV3P41162 512 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 C20orf194Q5TEA3 1177 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 FBXO11Q86XK2 927 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 DGKHQ86XP1 1220 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 MENTQ9BUN1 341 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 EMC7Q9NPA0 242 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 THG1LQ9NWX6 298 aaKnown RBP7.75□□□□□ -1.17
SPEN-202ENST00000438066 ZKSCAN5Q9Y2L8 839 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 DAGLAQ9Y4D2 1042 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 FANCIQ9NVI1 1328 aa7.75□□□□□ -1.17
SPEN-202ENST00000438066 FLT4P35916 1363 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 KIF24Q5T7B8 1368 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 WDR64B1ANS9 1081 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 THBDP07204 575 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 EIF4A2Q14240 407 aaKnown RBP7.74□□□□□ -1.17
SPEN-202ENST00000438066 APBB1IPQ7Z5R6 666 aaPredicted RBP7.74□□□□□ -1.17
SPEN-202ENST00000438066 FMR1NBQ8N0W7 255 aaPredicted RBP7.74□□□□□ -1.17
SPEN-202ENST00000438066 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.74□□□□□ -1.17
SPEN-202ENST00000438066 EVI5LQ96CN4 794 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 FUBP3Q96I24 572 aaKnown RBP eCLIP7.74□□□□□ -1.17
SPEN-202ENST00000438066 PHACTR3Q96KR7 559 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 MCMBPQ9BTE3 642 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 SPTLC3Q9NUV7 552 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 NXF1Q9UBU9 619 aaKnown RBP7.74□□□□□ -1.17
SPEN-202ENST00000438066 MAP3K19Q56UN5 1328 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 DCCP43146 1447 aa7.74□□□□□ -1.17
SPEN-202ENST00000438066 LMTK3Q96Q04 1460 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms