RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	RPS6KB1	P23443	525 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	MAP2K2	P36507	400 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SAMD5	Q5TGI4	173 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TAF3	Q5VWG9	929 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SLFN13	Q68D06	897 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ZNF662	Q6ZS27	426 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	RUFY3	Q7L099	469 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CATIP	Q7Z7H3	387 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CLEC10A	Q8IUN9	316 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	WDR19	Q8NEZ3	1342 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ACER1	Q8TDN7	264 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	LPAR1	Q92633	364 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SUSD3	Q96L08	255 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CEP63	Q96MT8	703 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TMEM47	Q9BQJ4	181 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TM6SF1	Q9BZW5	370 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	VCPKMT	Q9H867	229 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	IL17RB	Q9NRM6	502 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	PDRG1	Q9NUG6	133 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	MARK1	Q9P0L2	795 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	KCNH4	Q9UQ05	1017 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CTDP1	Q9Y5B0	961 aa	Predicted RBP	7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TAF6L	Q9Y6J9	622 aa		7.14	□□□□□ -1.27
ECHDC1-208	ENST00000436638	GOLGB1	Q14789	3259 aa	Known RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638		A0A0G2JLL6	359 aa	Predicted RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638		A0A1W2PRG0	241 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638		F5H6K3	240 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SH2B2	O14492	632 aa	Predicted RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	WDR46	O15213	610 aa	Known RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	DHX16	O60231	1041 aa	Known RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	EIF3J	O75822	258 aa	Known RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ARHGEF15	O94989	841 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CALM1	P0DP23	149 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CALM2	P0DP24	149 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CALM3	P0DP25	149 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SLC1A4	P43007	532 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	MARS	P56192	900 aa	Known RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	EXOSC10	Q01780	885 aa	Known RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	KLRC3	Q07444	240 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	IK	Q13123	557 aa	Predicted RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	RABEP1	Q15276	862 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ANKRD1	Q15327	319 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SWI5	Q1ZZU3	235 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TMEM164	Q5U3C3	297 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638		Q6ZUG5	572 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ANKRD23	Q86SG2	305 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ENAH	Q8N8S7	591 aa	Predicted RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	GMCL1P1	Q8NEA9	526 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	NUP133	Q8WUM0	1156 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ANKS1A	Q92625	1134 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TCEANC2	Q96MN5	208 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	LRRC2	Q9BYS8	371 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	UPF3B	Q9BZI7	483 aa	Known RBP	7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TANGO6	Q9C0B7	1094 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	PRR12	Q9ULL5	1215 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	AGTPBP1	Q9UPW5	1226 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SLC12A7	Q9Y666	1083 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	OTOF	Q9HC10	1997 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ATAD5	Q96QE3	1844 aa		7.13	□□□□□ -1.27
ECHDC1-208	ENST00000436638	BTBD19	C9JJ37	291 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	PDHX	O00330	501 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	DDAH1	O94760	285 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	NDUFB10	O96000	172 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	BMP3	P12645	472 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CPA1	P15085	419 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	VCAM1	P19320	739 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	KIF5B	P33176	963 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	LIFR	P42702	1097 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TM4SF4	P48230	202 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	NOV	P48745	357 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	NEK4	P51957	841 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ANTXR2	P58335	489 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	MAP2K1	Q02750	393 aa	Predicted RBP	7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SEC23A	Q15436	765 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TAF1C	Q15572	869 aa	Predicted RBP	7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	HIF1A	Q16665	826 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	RTN1	Q16799	776 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SIAH1	Q8IUQ4	282 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SPICE1	Q8N0Z3	855 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	GALNT6	Q8NCL4	622 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CTCFL	Q8NI51	663 aa	Predicted RBP	7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	IGDCC4	Q8TDY8	1250 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	SMCR8	Q8TEV9	937 aa	Predicted RBP	7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CHURC1	Q8WUH1	139 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	DCAF4	Q8WV16	495 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	BRI3BP	Q8WY22	251 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	UBXN4	Q92575	508 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	BRF1	Q92994	677 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	CHMP4C	Q96CF2	233 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	C12orf42	Q96LP6	360 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	TBC1D32	Q96NH3	1257 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	PARK7	Q99497	189 aa	Known RBP	7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	MAF1	Q9H063	256 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	RPAP3	Q9H6T3	665 aa	Predicted RBP	7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ZFYVE28	Q9HCC9	887 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	ZCCHC17	Q9NP64	241 aa	Known RBP	7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	GDF2	Q9UK05	429 aa	Predicted RBP	7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	HCN2	Q9UL51	889 aa		7.12	□□□□□ -1.27
ECHDC1-208	ENST00000436638	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.12	□□□□□ -1.27

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