RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 GMCL1Q96IK5 515 aa11.69□□□□□ -0.54
NOD1-206ENST00000434755 N4BP1O75113 896 aaKnown RBP11.69□□□□□ -0.54
NOD1-206ENST00000434755 VEGFAP15692 232 aaPredicted RBP11.69□□□□□ -0.54
NOD1-206ENST00000434755 ALCAMQ13740 583 aa11.69□□□□□ -0.54
NOD1-206ENST00000434755 LRRC41Q15345 812 aa11.69□□□□□ -0.54
NOD1-206ENST00000434755 MIS18BP1Q6P0N0 1132 aa11.69□□□□□ -0.54
NOD1-206ENST00000434755 CCDC50Q8IVM0 306 aa11.69□□□□□ -0.54
NOD1-206ENST00000434755 HACE1Q8IYU2 909 aa11.69□□□□□ -0.54
NOD1-206ENST00000434755 ADGRF4Q8IZF3 695 aa11.69□□□□□ -0.54
NOD1-206ENST00000434755 KRT222Q8N1A0 295 aa11.69□□□□□ -0.54
NOD1-206ENST00000434755 GMCL1P1Q8NEA9 526 aa11.69□□□□□ -0.54
NOD1-206ENST00000434755 SEPT14Q6ZU15 432 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 EPSTI1Q96J88 318 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 TEX13BQ9BXU2 312 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 CNTNAP5Q8WYK1 1306 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 RHOXF2BP0C7M4 288 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 TMOD1P28289 359 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 PRAMEF18Q5VWM3 479 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 MAATS1Q7Z4T9 603 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 PROM2Q8N271 834 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 SRBD1Q8N5C6 995 aaKnown RBP11.68□□□□□ -0.54
NOD1-206ENST00000434755 RHOXF2Q9BQY4 288 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 SPTLC3Q9NUV7 552 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 CEP83Q9Y592 693 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 ZEB2O60315 1214 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 PDHBP11177 359 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 TNFAIP3P21580 790 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 GBP2P32456 591 aaPredicted RBP11.68□□□□□ -0.54
NOD1-206ENST00000434755 SMC1AQ14683 1233 aaKnown RBP11.68□□□□□ -0.54
NOD1-206ENST00000434755 ZC3H15Q8WU90 426 aaKnown RBP11.68□□□□□ -0.54
NOD1-206ENST00000434755 DDX12PQ92771 950 aa11.68□□□□□ -0.54
NOD1-206ENST00000434755 ABT1Q9ULW3 272 aaKnown RBP11.68□□□□□ -0.54
NOD1-206ENST00000434755 GOLGA6L10A0A0M3HER8 536 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 M0QZ92 97 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 EPHX2P34913 555 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 IQCB1Q15051 598 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 USP17L6PQ6QN14 398 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 RNF146Q9NTX7 359 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 PANK4Q9NVE7 773 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 PCDHA6Q9UN73 950 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 PCDHA8Q9Y5H6 950 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.67□□□□□ -0.54
NOD1-206ENST00000434755 LRRIQ4A6NIV6 560 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
NOD1-206ENST00000434755 TBX3O15119 743 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 CETPP11597 493 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 SFNP31947 248 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 KRT76Q01546 638 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 STXBP2Q15833 593 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 RRAGAQ7L523 313 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 ERO1BQ86YB8 467 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 ZBTB8OSQ8IWT0 167 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 DEPTORQ8TB45 409 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 FAM167AQ96KS9 214 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 TBC1D12O60347 775 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 STAT3P40763 770 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 NTRK3Q16288 839 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 WHAMMP3Q1A5X7 153 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 Q3C1V9 767 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 PPP2R2CQ9Y2T4 447 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 BZW2Q9Y6E2 419 aaKnown RBP11.67□□□□□ -0.54
NOD1-206ENST00000434755 PDE4DIPQ5VU43 2346 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 HOXD10P28358 340 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 MAGEA1P43355 309 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 FKBP3Q00688 224 aaKnown RBP11.67□□□□□ -0.54
NOD1-206ENST00000434755 PTPROQ16827 1216 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 UNC13DQ70J99 1090 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 CHST13Q8NET6 341 aa11.67□□□□□ -0.54
NOD1-206ENST00000434755 CACTINQ8WUQ7 758 aaKnown RBP11.67□□□□□ -0.54
NOD1-206ENST00000434755 RPAP3Q9H6T3 665 aaPredicted RBP11.67□□□□□ -0.54
NOD1-206ENST00000434755 ASB14A6NK59 587 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 PSAPP07602 524 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 ODR4Q5SWX8 454 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
NOD1-206ENST00000434755 PARK7Q99497 189 aaKnown RBP11.66□□□□□ -0.54
NOD1-206ENST00000434755 AP5M1Q9H0R1 490 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 PRDM10Q9NQV6 1147 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 ARFGEF2Q9Y6D5 1785 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 DLATP10515 647 aaKnown RBP11.66□□□□□ -0.54
NOD1-206ENST00000434755 ST3GAL1Q11201 340 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 MAN2A1Q16706 1144 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 JAKMIP2Q96AA8 810 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 FUCA2Q9BTY2 467 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 FAM107BQ9H098 131 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 TMX2Q9Y320 296 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 MAFGO15525 162 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 LMAN1P49257 510 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 TFDP1Q14186 410 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 NEDD9Q14511 834 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 ASIC2Q16515 512 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 SNRNP48Q6IEG0 339 aaKnown RBP11.66□□□□□ -0.54
NOD1-206ENST00000434755 CCDC170Q8IYT3 715 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 NAP1L3Q99457 506 aaPredicted RBP11.66□□□□□ -0.54
NOD1-206ENST00000434755 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
NOD1-206ENST00000434755 ZMYND12Q9H0C1 365 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 MTMR14Q8NCE2 650 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 TRERF1Q96PN7 1200 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 HPSEQ9Y251 543 aa11.66□□□□□ -0.54
NOD1-206ENST00000434755 CICQ96RK0 1608 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms