RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ZNF662Q6ZS27 426 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 MMGT1Q8N4V1 131 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 NOX5Q96PH1 765 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 ZNF287Q9HBT7 754 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 MTMR4Q9NYA4 1195 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 POLLQ9UGP5 575 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 COL4A3BPQ9Y5P4 624 aa15.87■□□□□ 0.13
ERCC3-202ENST00000426778 COL5A3P25940 1745 aaPredicted RBP15.86■□□□□ 0.13
ERCC3-202ENST00000426778 CNTNAP4Q9C0A0 1308 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 GPR75-ASB3A0A0A6YYF3 556 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 TULP1O00294 542 aaPredicted RBP15.86■□□□□ 0.13
ERCC3-202ENST00000426778 IRAK1P51617 712 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 CASP5P51878 434 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 IQCEQ6IPM2 695 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 FAM196AQ6ZSG2 479 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 CCDC84Q86UT8 332 aaPredicted RBP15.86■□□□□ 0.13
ERCC3-202ENST00000426778 PACS2Q86VP3 889 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 PLCD3Q8N3E9 789 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 TSG101Q99816 390 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 RIOX1Q9H6W3 641 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 PCDHA12Q9UN75 941 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 LEMD3Q9Y2U8 911 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 RREB1Q92766 1687 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 POTEFA5A3E0 1075 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 ZEB2O60315 1214 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 KRT18P05783 430 aaKnown RBP15.86■□□□□ 0.13
ERCC3-202ENST00000426778 POTEIP0CG38 1075 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 HNRNPH3P31942 346 aaKnown RBP15.86■□□□□ 0.13
ERCC3-202ENST00000426778 CDK17Q00537 523 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 KIAA0753Q2KHM9 967 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 ASTE1Q2TB18 679 aaPredicted RBP15.86■□□□□ 0.13
ERCC3-202ENST00000426778 POTEGQ6S5H5 508 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 POTEEQ6S8J3 1075 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 CCDC43Q96MW1 224 aaKnown RBP15.86■□□□□ 0.13
ERCC3-202ENST00000426778 ZIM3Q96PE6 472 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 CENPHQ9H3R5 247 aa15.86■□□□□ 0.13
ERCC3-202ENST00000426778 SBF2Q86WG5 1849 aa15.85■□□□□ 0.13
ERCC3-202ENST00000426778 PPFIA4O75335 1185 aa15.85■□□□□ 0.13
ERCC3-202ENST00000426778 HEXIM1O94992 359 aaKnown RBP15.85■□□□□ 0.13
ERCC3-202ENST00000426778 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
ERCC3-202ENST00000426778 SFMBT2Q5VUG0 894 aa15.85■□□□□ 0.13
ERCC3-202ENST00000426778 GPBP1Q86WP2 473 aa15.85■□□□□ 0.13
ERCC3-202ENST00000426778 BCAS4Q8TDM0 211 aa15.85■□□□□ 0.13
ERCC3-202ENST00000426778 STK17AQ9UEE5 414 aa15.85■□□□□ 0.13
ERCC3-202ENST00000426778 RUFY1Q96T51 708 aa15.85■□□□□ 0.13
ERCC3-202ENST00000426778 DAGLAQ9Y4D2 1042 aa15.85■□□□□ 0.13
ERCC3-202ENST00000426778 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.85■□□□□ 0.13
ERCC3-202ENST00000426778 PVALEFA0A1B0GWK0 134 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 TCP1P17987 556 aaKnown RBP15.84■□□□□ 0.13
ERCC3-202ENST00000426778 LIG3P49916 1009 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 PSMC6P62333 389 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 LRRC63Q05C16 580 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 SLC9C1Q4G0N8 1177 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 PRR5LQ6MZQ0 368 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 CAPS2Q9BXY5 557 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 MYH7BA7E2Y1 1941 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 SLC9A1P19634 815 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 EPS15P42566 896 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 FKBP3Q00688 224 aaKnown RBP15.84■□□□□ 0.13
ERCC3-202ENST00000426778 NGLY1Q96IV0 654 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 GGA1Q9UJY5 639 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 PCDHAC2Q9Y5I4 1007 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 CDK5RAP2Q96SN8 1893 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 RPS6KA5O75582 802 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 GJB7Q6PEY0 223 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 DDX42Q86XP3 938 aaKnown RBP eCLIP15.84■□□□□ 0.13
ERCC3-202ENST00000426778 RAB34Q9BZG1 259 aa15.84■□□□□ 0.13
ERCC3-202ENST00000426778 PLA2G4BP0C869 781 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 CYP4A11Q02928 519 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 KLHL30Q0D2K2 578 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 ADAM9Q13443 819 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 TRAPPC3LQ5T215 181 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 CERS3Q8IU89 383 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 SCFD1Q8WVM8 642 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 FAM107BQ9H098 131 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 PSTPIP2Q9H939 334 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 MAST2Q6P0Q8 1798 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 SFI1A8K8P3 1242 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 TCP10Q12799 353 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 PABPC4Q13310 644 aaKnown RBP eCLIP15.83■□□□□ 0.128e-8■■■■■ 36.2
ERCC3-202ENST00000426778 DOK7Q18PE1 504 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 TMEM119Q4V9L6 283 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 DCAF17Q5H9S7 520 aaPredicted RBP15.83■□□□□ 0.12
ERCC3-202ENST00000426778 TCERG1LQ5VWI1 586 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 ZFPM1Q8IX07 1006 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 MICALL1Q8N3F8 863 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 AP1M1Q9BXS5 423 aa15.83■□□□□ 0.12
ERCC3-202ENST00000426778 HSF2BPO75031 334 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 MED24O75448 989 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 LCA5LO95447 670 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 NOP2P46087 812 aaKnown RBP15.82■□□□□ 0.12
ERCC3-202ENST00000426778 EPHB4P54760 987 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 GUCY1A3Q02108 690 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 CFAP221Q4G0U5 840 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 ZCWPW2Q504Y3 356 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 OR2W6PQ8NHA6 318 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 BCS1LQ9Y276 419 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 KCNK3O14649 394 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 FGFR1OPO95684 399 aaKnown RBP15.82■□□□□ 0.12
ERCC3-202ENST00000426778 KCNA1Q09470 495 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms