RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PLA2G4BP0C869 781 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 EIF2AK2P19525 551 aaKnown RBP16.98■□□□□ 0.31
ACTB-204ENST00000425660 SLC12A3P55017 1021 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 PDE4DQ08499 809 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 DHX8Q14562 1220 aaKnown RBP16.98■□□□□ 0.31
ACTB-204ENST00000425660 CDKAL1Q5VV42 579 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 MAP1SQ66K74 1059 aaPredicted RBP16.98■□□□□ 0.31
ACTB-204ENST00000425660 POTEGQ6S5H5 508 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 GADL1Q6ZQY3 521 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 FASTKD5Q7L8L6 764 aaKnown RBP16.98■□□□□ 0.31
ACTB-204ENST00000425660 VSIG10LQ86VR7 867 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 DNAJC19Q96DA6 116 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 NMRK2Q9NPI5 230 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 IFNKQ9P0W0 207 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 DHX15O43143 795 aaKnown RBP16.98■□□□□ 0.31
ACTB-204ENST00000425660 FKBP1BP68106 108 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 STK4Q13043 487 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 MTMR1Q13613 665 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 ARHGEF16Q5VV41 709 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 RIOX2Q8IUF8 465 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 NSUN6Q8TEA1 469 aaKnown RBP16.98■□□□□ 0.31
ACTB-204ENST00000425660 TEKT3Q9BXF9 490 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 ASCC2Q9H1I8 757 aaPredicted RBP16.98■□□□□ 0.31
ACTB-204ENST00000425660 AGO4Q9HCK5 861 aaKnown RBP16.98■□□□□ 0.31
ACTB-204ENST00000425660 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.98■□□□□ 0.31
ACTB-204ENST00000425660 BTBD7Q9P203 1132 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 DNM3Q9UQ16 869 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 CTNND2Q9UQB3 1225 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 CLEC11AQ9Y240 323 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 ZKSCAN5Q9Y2L8 839 aa16.98■□□□□ 0.31
ACTB-204ENST00000425660 SLITRK3O94933 977 aa16.97■□□□□ 0.31
ACTB-204ENST00000425660 IRX3P78415 501 aaPredicted RBP16.97■□□□□ 0.31
ACTB-204ENST00000425660 STIM1Q13586 685 aa16.97■□□□□ 0.31
ACTB-204ENST00000425660 SYT2Q8N9I0 419 aaPredicted RBP16.97■□□□□ 0.31
ACTB-204ENST00000425660 NELFBQ8WX92 580 aa16.97■□□□□ 0.31
ACTB-204ENST00000425660 DHTKD1Q96HY7 919 aaPredicted RBP16.97■□□□□ 0.31
ACTB-204ENST00000425660 ZFP91Q96JP5 570 aaPredicted RBP16.97■□□□□ 0.31
ACTB-204ENST00000425660 PURBQ96QR8 312 aaKnown RBP16.97■□□□□ 0.31
ACTB-204ENST00000425660 UNC45AQ9H3U1 944 aa16.97■□□□□ 0.31
ACTB-204ENST00000425660 SAMSN1Q9NSI8 373 aaKnown RBP16.97■□□□□ 0.31
ACTB-204ENST00000425660 FBXO40Q9UH90 709 aa16.97■□□□□ 0.31
ACTB-204ENST00000425660 TRAF5O00463 557 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 PSMA7O14818 248 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 MAFGO15525 162 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 NR3C2P08235 984 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 CYP11B2P19099 503 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 GJA5P36382 358 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 STX17P56962 302 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 UBASH3AP57075 661 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 HERVK_113P62684 666 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 PSMD2Q13200 908 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 PLS1Q14651 629 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 EPHA7Q15375 998 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 DYMQ7RTS9 669 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 KIAA0895Q8NCT3 520 aa16.96■□□□□ 0.31
ACTB-204ENST00000425660 BMP2KQ9NSY1 1161 aaPredicted RBP16.96■□□□□ 0.31
ACTB-204ENST00000425660 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.31
ACTB-204ENST00000425660 FRMD3A2A2Y4 597 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 CBFA2T2O43439 604 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 SERPINC1P01008 464 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 FCER1AP12319 257 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 CCND2P30279 289 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 PSMC6P62333 389 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 PABPC4Q13310 644 aaKnown RBP eCLIP16.96■□□□□ 0.31e-323■■□□□ 13.6
ACTB-204ENST00000425660 ITGB3BPQ13352 177 aaPredicted RBP16.96■□□□□ 0.3
ACTB-204ENST00000425660 SNAPC2Q13487 334 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 GPAT2Q6NUI2 795 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.36e-19■■□□□ 12.8
ACTB-204ENST00000425660 DRC7Q8IY82 874 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 NEK9Q8TD19 979 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 INPP4AQ96PE3 977 aaPredicted RBP16.96■□□□□ 0.3
ACTB-204ENST00000425660 SPATC1LQ9H0A9 340 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 TBC1D22BQ9NU19 505 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 RGL1Q9NZL6 768 aa16.96■□□□□ 0.3
ACTB-204ENST00000425660 STAM2O75886 525 aa16.95■□□□□ 0.3
ACTB-204ENST00000425660 CYP4A11Q02928 519 aa16.95■□□□□ 0.3
ACTB-204ENST00000425660 ARSHQ5FYA8 562 aa16.95■□□□□ 0.3
ACTB-204ENST00000425660 APTXQ7Z2E3 356 aaKnown RBP16.95■□□□□ 0.3
ACTB-204ENST00000425660 DNERQ8NFT8 737 aa16.95■□□□□ 0.3
ACTB-204ENST00000425660 GPRASP2Q96D09 838 aa16.95■□□□□ 0.3
ACTB-204ENST00000425660 SLC10A4Q96EP9 437 aa16.95■□□□□ 0.3
ACTB-204ENST00000425660 IMPACTQ9P2X3 320 aa16.95■□□□□ 0.3
ACTB-204ENST00000425660 MAPK8IP1Q9UQF2 711 aa16.95■□□□□ 0.3
ACTB-204ENST00000425660 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.95■□□□□ 0.36e-21■■■□□ 14.8
ACTB-204ENST00000425660 PFASO15067 1338 aa16.95■□□□□ 0.3
ACTB-204ENST00000425660 LRRC10BA6NIK2 292 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 CHMP2AO43633 222 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 CNMDO75829 334 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 EYA4O95677 639 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 TTI2Q6NXR4 508 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 CCDC186Q7Z3E2 898 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 FAM43AQ8N2R8 423 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 NAP1L5Q96NT1 182 aaPredicted RBP16.94■□□□□ 0.3
ACTB-204ENST00000425660 IWS1Q96ST2 819 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 NRBP1Q9UHY1 535 aa16.94■□□□□ 0.3
ACTB-204ENST00000425660 MYCLP12524 364 aaPredicted RBP16.93■□□□□ 0.3
ACTB-204ENST00000425660 CDK11BP21127 795 aaKnown RBP16.93■□□□□ 0.3
ACTB-204ENST00000425660 PMS1P54277 932 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms