RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 C16orf70Q9BSU1 422 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 ANO3Q9BYT9 981 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 UPF3BQ9BZI7 483 aaKnown RBP17.53■□□□□ 0.4
NUP50-204ENST00000417702 BCAS3Q9H6U6 928 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 JADE2Q9NQC1 790 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 MTMR10Q9NXD2 777 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 UBIAD1Q9Y5Z9 338 aa17.53■□□□□ 0.4
NUP50-204ENST00000417702 H3BRB1 525 aa17.52■□□□□ 0.4
NUP50-204ENST00000417702 MAFGO15525 162 aa17.52■□□□□ 0.4
NUP50-204ENST00000417702 LGALS2P05162 132 aa17.52■□□□□ 0.4
NUP50-204ENST00000417702 RFC2P35250 354 aa17.52■□□□□ 0.4
NUP50-204ENST00000417702 CCT2P78371 535 aaKnown RBP17.52■□□□□ 0.4
NUP50-204ENST00000417702 SP4Q02446 784 aa17.52■□□□□ 0.4
NUP50-204ENST00000417702 RASIP1Q5U651 963 aa17.52■□□□□ 0.4
NUP50-204ENST00000417702 OTOP2Q7RTS6 562 aa17.52■□□□□ 0.4
NUP50-204ENST00000417702 TUT1Q9H6E5 874 aaKnown RBP17.52■□□□□ 0.4
NUP50-204ENST00000417702 C6orf50Q9HD87 102 aa17.52■□□□□ 0.4
NUP50-204ENST00000417702 PDRG1Q9NUG6 133 aa17.52■□□□□ 0.4
NUP50-204ENST00000417702 ESYT2A0FGR8 921 aa17.51■□□□□ 0.39
NUP50-204ENST00000417702 IQCF3P0C7M6 154 aa17.51■□□□□ 0.39
NUP50-204ENST00000417702 IFNAR1P17181 557 aa17.51■□□□□ 0.39
NUP50-204ENST00000417702 TOB2Q14106 344 aaPredicted RBP17.51■□□□□ 0.39
NUP50-204ENST00000417702 DEFB128Q7Z7B8 93 aa17.51■□□□□ 0.39
NUP50-204ENST00000417702 AFAP1L1Q8TED9 768 aa17.51■□□□□ 0.39
NUP50-204ENST00000417702 PHKBQ93100 1093 aa17.51■□□□□ 0.39
NUP50-204ENST00000417702 PGBD1Q96JS3 809 aa17.51■□□□□ 0.39
NUP50-204ENST00000417702 SLC26A6Q9BXS9 759 aa17.51■□□□□ 0.39
NUP50-204ENST00000417702 RNF26Q9BY78 433 aaPredicted RBP17.51■□□□□ 0.39
NUP50-204ENST00000417702 ZNF215Q9UL58 517 aaPredicted RBP17.51■□□□□ 0.39
NUP50-204ENST00000417702 CPLX1O14810 134 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 ATP9AO75110 1047 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 ACTN1P12814 892 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 KCNA2P16389 499 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 GNA11P29992 359 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 PTK7Q13308 1070 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 NTRK3Q16288 839 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 PKN1Q16512 942 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 UTP14CQ5TAP6 766 aaKnown RBP17.5■□□□□ 0.39
NUP50-204ENST00000417702 MCTP2Q6DN12 878 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 TRIM22Q8IYM9 498 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 ZNF274Q96GC6 653 aaPredicted RBP17.5■□□□□ 0.39
NUP50-204ENST00000417702 FAM161BQ96MY7 647 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 CTAGE1Q96RT6 745 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 MXRA8Q9BRK3 442 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 FTOQ9C0B1 505 aaKnown RBP eCLIP17.5■□□□□ 0.39
NUP50-204ENST00000417702 ZMYND12Q9H0C1 365 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
NUP50-204ENST00000417702 TMEM260Q9NX78 707 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 PKD2L1Q9P0L9 805 aa17.5■□□□□ 0.39
NUP50-204ENST00000417702 TMEM265A0A087WTH1 108 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 C17orf102A2RUQ5 167 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 ZBBXA8MT70 800 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 PARNO95453 639 aaKnown RBP17.49■□□□□ 0.39
NUP50-204ENST00000417702 SMIM10L2AP0DMW4 78 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 SMIM10L2BP0DMW5 78 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 SELPP16109 830 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 ZNF76P36508 570 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 SREBF1P36956 1147 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 CLK2P49760 499 aaKnown RBP17.49■□□□□ 0.39
NUP50-204ENST00000417702 ANAPC15P60006 121 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 CEP55Q53EZ4 464 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 JAKMIP3Q5VZ66 844 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
NUP50-204ENST00000417702 CCDC148Q8NFR7 591 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 SEPT1Q8WYJ6 367 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 DHX38Q92620 1227 aaKnown RBP17.49■□□□□ 0.39
NUP50-204ENST00000417702 SEMA6BQ9H3T3 888 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 KCNH7Q9NS40 1196 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 CXXC1Q9P0U4 656 aaPredicted RBP17.49■□□□□ 0.39
NUP50-204ENST00000417702 SLC4A7Q9Y6M7 1214 aa17.49■□□□□ 0.39
NUP50-204ENST00000417702 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 GNAT1P11488 350 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 DNAJB2P25686 324 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 TCF7P36402 384 aaPredicted RBP17.48■□□□□ 0.39
NUP50-204ENST00000417702 ARHGAP4P98171 946 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 ZNF200P98182 395 aaPredicted RBP17.48■□□□□ 0.39
NUP50-204ENST00000417702 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
NUP50-204ENST00000417702 RBL2Q08999 1139 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 LRRC8DQ7L1W4 858 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 TRIM50Q86XT4 487 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 REXO1Q8N1G1 1221 aaKnown RBP17.48■□□□□ 0.39
NUP50-204ENST00000417702 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 ATP6V0A1Q93050 837 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 SDF4Q9BRK5 362 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 LARP6Q9BRS8 491 aaKnown RBP17.48■□□□□ 0.39
NUP50-204ENST00000417702 JPH1Q9HDC5 661 aaPredicted RBP17.48■□□□□ 0.39
NUP50-204ENST00000417702 STXBP5LQ9Y2K9 1186 aa17.48■□□□□ 0.39
NUP50-204ENST00000417702 TRIP12Q14669 1992 aaPredicted RBP17.48■□□□□ 0.39
NUP50-204ENST00000417702 GRXCR1A8MXD5 290 aa17.47■□□□□ 0.39
NUP50-204ENST00000417702 CKBP12277 381 aa17.47■□□□□ 0.39
NUP50-204ENST00000417702 CYP2W1Q8TAV3 490 aa17.47■□□□□ 0.39
NUP50-204ENST00000417702 TIFAQ96CG3 184 aa17.47■□□□□ 0.39
NUP50-204ENST00000417702 VWCEQ96DN2 955 aa17.47■□□□□ 0.39
NUP50-204ENST00000417702 MSRAQ9UJ68 235 aa17.47■□□□□ 0.39
NUP50-204ENST00000417702 TELO2Q9Y4R8 837 aa17.47■□□□□ 0.39
NUP50-204ENST00000417702 MEIS1O00470 390 aa17.46■□□□□ 0.39
NUP50-204ENST00000417702 STK3Q13188 491 aa17.46■□□□□ 0.39
NUP50-204ENST00000417702 RAB30Q15771 203 aa17.46■□□□□ 0.39
NUP50-204ENST00000417702 NIPA1Q7RTP0 329 aa17.46■□□□□ 0.39
NUP50-204ENST00000417702 SERINC5Q86VE9 423 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms