RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PDS5AQ29RF7 1337 aaKnown RBP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 CICQ96RK0 1608 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 ITGB4P16144 1822 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 COL4A1P02462 1669 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 PDE2AO00408 941 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 RHOBTB3O94955 611 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 SRGNP10124 158 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 GTF2A1P52655 376 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 ZBED6P86452 979 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 EHHADHQ08426 723 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 CNNM4Q6P4Q7 775 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 GJB7Q6PEY0 223 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 TRAPPC11Q7Z392 1133 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 COL23A1Q86Y22 540 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 OGFOD1Q8N543 542 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 LRRC53A6NM62 1247 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 PSMC6P62333 389 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 ABCB5Q2M3G0 1257 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 DHTKD1Q96HY7 919 aaPredicted RBP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 JMJD4Q9H9V9 463 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.76□□□□□ -0.05
COL6A2-204ENST00000409416 CAPN6Q9Y6Q1 641 aa14.76□□□□□ -0.05
COL6A2-204ENST00000409416 PAPPAQ13219 1627 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 MYBL2P10244 700 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 GGCXP38435 758 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 AMPD2Q01433 879 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 ADAM9Q13443 819 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 VPS72Q15906 364 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 NEDD1Q8NHV4 660 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 FAM71BQ8TC56 605 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 COG1Q8WTW3 980 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 DNAJC7Q99615 494 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 USP20Q9Y2K6 914 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 DUOX1Q9NRD9 1551 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 HGSO14964 777 aaPredicted RBP14.75□□□□□ -0.05
COL6A2-204ENST00000409416 ACER1Q8TDN7 264 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 HNRNPLLQ8WVV9 542 aaKnown RBP14.75□□□□□ -0.05
COL6A2-204ENST00000409416 GOPCQ9HD26 462 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 KBTBD4Q9NVX7 518 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 RRP15Q9Y3B9 282 aaKnown RBP14.75□□□□□ -0.05
COL6A2-204ENST00000409416 F5H6K3 240 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 MYO1CO00159 1063 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 ZEB2O60315 1214 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 ALAS1P13196 640 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 KIF11P52732 1056 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 KLRC3Q07444 240 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 FAM83BQ5T0W9 1011 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 HDAC7Q8WUI4 952 aa14.75□□□□□ -0.05
COL6A2-204ENST00000409416 TMEM150BA6NC51 233 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 MYOCDQ8IZQ8 938 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 ALS2CR12Q96Q35 445 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 NUP58Q9BVL2 599 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 SELENOOQ9BVL4 669 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 UBXN6Q9BZV1 441 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 NDST4Q9H3R1 872 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 GOLGA8IPA6NC78 632 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 GOLGA8JA6NMD2 632 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 PSMD14O00487 310 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 NR2F2P24468 414 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 KCNB1Q14721 858 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 SBK1Q52WX2 424 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 TMED8Q6PL24 325 aaPredicted RBP14.74□□□□□ -0.05
COL6A2-204ENST00000409416 ZNF507Q8TCN5 953 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 CCSER1Q9C0I3 900 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 PCDHA13Q9Y5I0 950 aa14.74□□□□□ -0.05
COL6A2-204ENST00000409416 SHANK3Q9BYB0 1731 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 A0A1W2PQC6 194 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 GOLGA6BA6NDN3 693 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 FAM13AO94988 1023 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 PAFAH1B1P43034 410 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 ATP1A2P50993 1020 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 KCNA1Q09470 495 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 ZC2HC1CQ53FD0 456 aaPredicted RBP14.73□□□□□ -0.05
COL6A2-204ENST00000409416 IQCEQ6IPM2 695 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 KIAA0895Q8NCT3 520 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 CCDC127Q96BQ5 260 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 LRRC1Q9BTT6 524 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 SEMA6BQ9H3T3 888 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 TRPC5Q9UL62 973 aaPredicted RBP14.73□□□□□ -0.05
COL6A2-204ENST00000409416 MYH14Q7Z406 1995 aaKnown RBP14.73□□□□□ -0.05
COL6A2-204ENST00000409416 ECE2O60344 883 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 BBOX1O75936 387 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 ZBTB7AO95365 584 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 FGRP09769 529 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 ECM1Q16610 540 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 CCDC113Q9H0I3 377 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 RASSF4Q9H2L5 321 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 SH3GLB2Q9NR46 395 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 PLA2G4BP0C869 781 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 PPP1R18Q6NYC8 613 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 DEFB132Q7Z7B7 95 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 FBXO11Q86XK2 927 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 BANK1Q8NDB2 785 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 PRMT6Q96LA8 375 aaPredicted RBP14.73□□□□□ -0.05
COL6A2-204ENST00000409416 ANO3Q9BYT9 981 aa14.73□□□□□ -0.05
COL6A2-204ENST00000409416 VAV2P52735 878 aa14.72□□□□□ -0.05
COL6A2-204ENST00000409416 RHBDL3P58872 404 aa14.72□□□□□ -0.05
COL6A2-204ENST00000409416 KLHL30Q0D2K2 578 aa14.72□□□□□ -0.05
COL6A2-204ENST00000409416 VWA3BQ502W6 1294 aa14.72□□□□□ -0.05
COL6A2-204ENST00000409416 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms