RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 NAP1L2Q9ULW6 460 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 Q9Y3F1 56 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 PCDHB3Q9Y5E6 796 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 UMODL1Q5DID0 1318 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 MYH7BA7E2Y1 1941 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 SCN10AQ9Y5Y9 1956 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 GOLGA8AA7E2F4 631 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 GOLGA8BA8MQT2 603 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 NKRFO15226 690 aaKnown RBP eCLIP6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 ZBTB43O43298 467 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 B4GALT4O60513 344 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 EIF3JO75822 258 aaKnown RBP6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 CABYRO75952 493 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 GH1P01241 217 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 CENPBP07199 599 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 CALM1P0DP23 149 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 CALM2P0DP24 149 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 CALM3P0DP25 149 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 CDC27P30260 824 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 CYP2C18P33260 490 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 CPT1AP50416 773 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 FGD1P98174 961 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 APOBRQ0VD83 1088 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 TRAF1Q13077 416 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 HIC1Q14526 733 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 KRT32Q14532 448 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 UBE2SQ16763 222 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 RTN1Q16799 776 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 NBPF20Q3BBV1 942 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 FAM47CQ5HY64 1035 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 SYNE3Q6ZMZ3 975 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 Q6ZUG5 572 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 HEATR3Q7Z4Q2 680 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 VSIG10LQ86VR7 867 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 SMARCC2Q8TAQ2 1214 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 KCNB2Q92953 911 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 BRF1Q92994 677 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 LZTS2Q9BRK4 669 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 MTG1Q9BT17 334 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 TMUB1Q9BVT8 246 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 MAF1Q9H063 256 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 BCAS3Q9H6U6 928 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 TRMT13Q9NUP7 481 aaKnown RBP6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 POLR3EQ9NVU0 708 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 DDX41Q9UJV9 622 aaKnown RBP6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 MRVI1Q9Y6F6 885 aa6.65□□□□□ -1.34
HMGB1P20-201ENST00000402555 MROH7Q68CQ1 1323 aa6.65□□□□□ -1.35
HMGB1P20-201ENST00000402555 CNTNAP5Q8WYK1 1306 aa6.65□□□□□ -1.35
HMGB1P20-201ENST00000402555 DOCK5Q9H7D0 1870 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 MYO9BQ13459 2157 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 A6NJR5 290 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 MEIS2O14770 477 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 TLR3O15455 904 aaKnown RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 ACTN4O43707 911 aaKnown RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 PPFIA3O75145 1194 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 REC8O95072 547 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 GGPS1O95749 300 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 TIMP1P01033 207 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 CD4P01730 458 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 OATP04181 439 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 MMP3P08254 477 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 ZNF286BP0CG31 522 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 ACRP10323 421 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 CYP2C9P11712 490 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 CSF2RAP15509 400 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 CASTP20810 708 aaKnown RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 UBA1P22314 1058 aaKnown RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 RPS6KB1P23443 525 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 SMARCA1P28370 1054 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 CCND2P30279 289 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 CCL23P55773 120 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 MRPS9P82933 396 aaKnown RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 SP2Q02086 613 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 FPGSQ05932 587 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 FUT2Q10981 343 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 LRIT3Q3SXY7 679 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 BRDTQ58F21 947 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 WWC2Q6AWC2 1192 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 BLOC1S3Q6QNY0 202 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 BLOC1S2Q6QNY1 142 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 Q6ZNB5 142 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 Q7L0L9 218 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 C16orf59Q7L2K0 433 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 DHX37Q8IY37 1157 aaKnown RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 KAT2BQ92831 832 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 CUL5Q93034 780 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 ALDH8A1Q9H2A2 487 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 FAM217BQ9NTX9 383 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 MAP3K20Q9NYL2 800 aaKnown RBP6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 RTEL1Q9NZ71 1219 aa6.64□□□□□ -1.35
HMGB1P20-201ENST00000402555 GPR37O15354 613 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 HMGB1P09429 215 aaKnown RBP6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 ADD1P35611 737 aaKnown RBP6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 GGCXP38435 758 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 METAP2P50579 478 aaKnown RBP eCLIP6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 SEMA3FQ13275 785 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 FRMPD4Q14CM0 1322 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 HSDL1Q3SXM5 330 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 KMT5BQ4FZB7 885 aa6.63□□□□□ -1.35
HMGB1P20-201ENST00000402555 MYSM1Q5VVJ2 828 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms