RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CCDC43Q96MW1 224 aaKnown RBP13.96□□□□□ -0.17
PPP4R1-202ENST00000400555 DDX4Q9NQI0 724 aaKnown RBP13.96□□□□□ -0.17
PPP4R1-202ENST00000400555 EMILIN3Q9NT22 766 aa13.96□□□□□ -0.17
PPP4R1-202ENST00000400555 SMIM23A6NLE4 172 aa13.96□□□□□ -0.18
PPP4R1-202ENST00000400555 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.18
PPP4R1-202ENST00000400555 TTLL1O95922 423 aa13.96□□□□□ -0.18
PPP4R1-202ENST00000400555 IVLP07476 585 aa13.96□□□□□ -0.18
PPP4R1-202ENST00000400555 PRPHP41219 470 aa13.96□□□□□ -0.18
PPP4R1-202ENST00000400555 BCAS4Q8TDM0 211 aa13.96□□□□□ -0.18
PPP4R1-202ENST00000400555 TSPYL1Q9H0U9 437 aa13.96□□□□□ -0.18
PPP4R1-202ENST00000400555 TOGARAM1Q9Y4F4 1720 aa13.96□□□□□ -0.18
PPP4R1-202ENST00000400555 SPDYE3A6NKU9 549 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 TMEM110-MUSTN1A8MSY1 372 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 KRT14P02533 472 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 KSR1Q8IVT5 923 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 TBC1D16Q8TBP0 767 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 IKZF4Q9H2S9 585 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 BCAS3Q9H6U6 928 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 CFBP00751 764 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 ATP2B4P23634 1241 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 TUBB4BP68371 445 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 CFAP221Q4G0U5 840 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 TPH2Q8IWU9 490 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 ZFPM1Q8IX07 1006 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 SH2D4AQ9H788 454 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 GOPCQ9HD26 462 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 MED4Q9NPJ6 270 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 KCNQ5Q9NR82 932 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 PLAGL2Q9UPG8 496 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 MYH10P35580 1976 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 LRP6O75581 1613 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 TBCAO75347 108 aaKnown RBP13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 MYL1P05976 194 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 KLRC1P26715 233 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 LIG3P49916 1009 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 PDCLQ13371 301 aa13.95□□□□□ -0.18
PPP4R1-202ENST00000400555 TUBBP07437 444 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 SLC9A1P19634 815 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 CARSP49589 748 aaKnown RBP13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 TRADDQ15628 312 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 ARHGAP44Q17R89 818 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 RNF187Q5TA31 235 aaPredicted RBP13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 GJB7Q6PEY0 223 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 SH2D3AQ9BRG2 576 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 MKRN1Q9UHC7 482 aaKnown RBP13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 PAPD7Q5XG87 772 aaKnown RBP13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 SLFN13Q68D06 897 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 CENPPQ6IPU0 288 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 GUF1Q8N442 669 aaKnown RBP13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 STK17AQ9UEE5 414 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 A0A087X0T9 212 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 GPR75-ASB3A0A0A6YYF3 556 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 FAM228BP0C875 321 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 TCP1P17987 556 aaKnown RBP13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 PSMC6P62333 389 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 QRICH1Q2TAL8 776 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 ERGIC2Q96RQ1 377 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 BHMT2Q9H2M3 363 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 RGL1Q9NZL6 768 aa13.94□□□□□ -0.18
PPP4R1-202ENST00000400555 BACH1O14867 736 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 DDX42Q86XP3 938 aaKnown RBP eCLIP13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 U2AF1L4Q8WU68 220 aaKnown RBP13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 ARMCX3Q9UH62 379 aaPredicted RBP13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 FEZ2Q9UHY8 353 aaPredicted RBP13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 MYH3P11055 1940 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 SHTN1A0MZ66 631 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 M0R2N6 131 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 CYP2J2P51589 502 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 PPP4CP60510 307 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 KCNH2Q12809 1159 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 SEPT2Q15019 361 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 PDXDC1Q6P996 788 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 LRRC31Q6UY01 552 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 CREG2Q8IUH2 290 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 ARL8AQ96BM9 186 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 FAM184BQ9ULE4 1060 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 SCAF8Q9UPN6 1271 aaKnown RBP13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 DNM3Q9UQ16 869 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 CICQ96RK0 1608 aaPredicted RBP13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 RSPH10B2B2RC85 870 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 SYF2O95926 243 aaKnown RBP13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 RSPH10BP0C881 870 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 RHBDL3P58872 404 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 MYH14Q7Z406 1995 aaKnown RBP13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 SFR1Q86XK3 245 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 UHMK1Q8TAS1 419 aaKnown RBP13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 LRRC27Q9C0I9 530 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 DPH5Q9H2P9 285 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 DISP2A7MBM2 1401 aa13.93□□□□□ -0.18
PPP4R1-202ENST00000400555 NDUFAB1O14561 156 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 CTTNQ14247 550 aaKnown RBP13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 RPS6KA1Q15418 735 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 MEA1Q16626 185 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 DAGLBQ8NCG7 672 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 CYP2W1Q8TAV3 490 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 MAGEF1Q9HAY2 307 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms