RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RETREG2Q8NC44 543 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 ATP6V0A1Q93050 837 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 CEP170P1Q96L14 293 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 HAUS4Q9H6D7 363 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 SUGCTQ9HAC7 445 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 TACC3Q9Y6A5 838 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 IPO5O00410 1097 aaKnown RBP15.44■□□□□ 0.06
SCAF4-202ENST00000399804 STAT1P42224 750 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 MTMR1Q13613 665 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 CEP55Q53EZ4 464 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 SFR1Q86XK3 245 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 FMNL3Q8IVF7 1028 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 DEPTORQ8TB45 409 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 DYDC2Q96IM9 177 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
SCAF4-202ENST00000399804 MFAP3LO75121 409 aa15.43■□□□□ 0.06
SCAF4-202ENST00000399804 APOBEC3FQ8IUX4 373 aaKnown RBP15.43■□□□□ 0.06
SCAF4-202ENST00000399804 SMAP1Q8IYB5 467 aaPredicted RBP15.43■□□□□ 0.06
SCAF4-202ENST00000399804 SLC37A4O43826 429 aa15.43■□□□□ 0.06
SCAF4-202ENST00000399804 ANGEL2Q5VTE6 544 aaKnown RBP15.43■□□□□ 0.06
SCAF4-202ENST00000399804 FAM186BQ8IYM0 893 aa15.43■□□□□ 0.06
SCAF4-202ENST00000399804 RPAP3Q9H6T3 665 aaPredicted RBP15.43■□□□□ 0.06
SCAF4-202ENST00000399804 LGALS16A8MUM7 142 aa15.43■□□□□ 0.06
SCAF4-202ENST00000399804 ONECUT3O60422 494 aaPredicted RBP15.43■□□□□ 0.06
SCAF4-202ENST00000399804 DMP1Q13316 513 aaPredicted RBP15.43■□□□□ 0.06
SCAF4-202ENST00000399804 BANK1Q8NDB2 785 aa15.43■□□□□ 0.06
SCAF4-202ENST00000399804 PANX2Q96RD6 677 aa15.43■□□□□ 0.06
SCAF4-202ENST00000399804 SEPT9Q9UHD8 586 aaPredicted RBP15.43■□□□□ 0.06
SCAF4-202ENST00000399804 BCRP11274 1271 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 IREB2P48200 963 aaKnown RBP15.42■□□□□ 0.06
SCAF4-202ENST00000399804 PRELPP51888 382 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 ZBED6P86452 979 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 SETQ01105 290 aaPredicted RBP15.42■□□□□ 0.06
SCAF4-202ENST00000399804 KCTD2Q14681 263 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 PROM2Q8N271 834 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 TNNI1P19237 187 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 POLGP54098 1239 aaPredicted RBP15.42■□□□□ 0.06
SCAF4-202ENST00000399804 ADSSL1Q8N142 457 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 GUF1Q8N442 669 aaKnown RBP15.42■□□□□ 0.06
SCAF4-202ENST00000399804 PCIF1Q9H4Z3 704 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 MYMKA6NI61 221 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 USP27XA6NNY8 438 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 FGRP09769 529 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 CCND2P30279 289 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 ANKRD40Q6AI12 368 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 EIF2AK1Q9BQI3 630 aaKnown RBP15.42■□□□□ 0.06
SCAF4-202ENST00000399804 IDI2Q9BXS1 227 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 HOXC10Q9NYD6 342 aa15.42■□□□□ 0.06
SCAF4-202ENST00000399804 LRRIQ4A6NIV6 560 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 CYP27A1Q02318 531 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 UTP14CQ5TAP6 766 aaKnown RBP15.41■□□□□ 0.06
SCAF4-202ENST00000399804 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 FAM184BQ9ULE4 1060 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 PSMC2P35998 433 aaKnown RBP15.41■□□□□ 0.06
SCAF4-202ENST00000399804 TUBB4BP68371 445 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 DPH6Q7L8W6 267 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 DLATP10515 647 aaKnown RBP15.41■□□□□ 0.06
SCAF4-202ENST00000399804 DESP17661 470 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 TUBB2AQ13885 445 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 KIAA0753Q2KHM9 967 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 KRT222Q8N1A0 295 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 TUBB2BQ9BVA1 445 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 SYNCQ9H7C4 482 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 SPON1Q9HCB6 807 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 RHOBTB3O94955 611 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 CAP2P40123 477 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 LIG4P49917 911 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 LEKR1Q6ZMV7 388 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 SLC35F6Q8N357 371 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 METTL13Q8N6R0 699 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 MTFR1LQ9H019 292 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 SPTLC3Q9NUV7 552 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 ADD3Q9UEY8 706 aaKnown RBP15.41■□□□□ 0.06
SCAF4-202ENST00000399804 FAM198AQ9UFP1 575 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 SAR1BQ9Y6B6 198 aa15.41■□□□□ 0.06
SCAF4-202ENST00000399804 GOLGA6L10A0A0M3HER8 536 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 HNRNPDLO14979 420 aaKnown RBP15.4■□□□□ 0.06
SCAF4-202ENST00000399804 AFPP02771 609 aaKnown RBP15.4■□□□□ 0.06
SCAF4-202ENST00000399804 ELOA2Q8IYF1 753 aaPredicted RBP15.4■□□□□ 0.06
SCAF4-202ENST00000399804 U2AF1L4Q8WU68 220 aaKnown RBP15.4■□□□□ 0.06
SCAF4-202ENST00000399804 POMGNT1Q8WZA1 660 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 LPAR1Q92633 364 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 C7orf25Q9BPX7 421 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 GGA3Q9NZ52 723 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 KCNG1Q9UIX4 513 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 WDR46O15213 610 aaKnown RBP15.4■□□□□ 0.06
SCAF4-202ENST00000399804 NCBP1Q09161 790 aaKnown RBP15.4■□□□□ 0.06
SCAF4-202ENST00000399804 AGBL1Q96MI9 1066 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 TRPC6Q9Y210 931 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 NPHP3-ACAD11A0A0J9YXS1 232 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 BUB1O43683 1085 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 NDUFA10O95299 355 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 GJC1P36383 396 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 TGFB2P61812 414 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 FUT2Q10981 343 aa15.4■□□□□ 0.06
SCAF4-202ENST00000399804 PLVAPQ9BX97 442 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 HACL1Q9UJ83 578 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 ABCB4P21439 1286 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 MKRN3Q13064 507 aaKnown RBP15.39■□□□□ 0.05
SCAF4-202ENST00000399804 MTERF2Q49AM1 385 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms