RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 DARS2Q6PI48 645 aaKnown RBP17.41■□□□□ 0.38
ITSN1-209ENST00000399352 SESTD1Q86VW0 696 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 CCDC124Q96CT7 223 aaKnown RBP17.41■□□□□ 0.38
ITSN1-209ENST00000399352 PGBD1Q96JS3 809 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 CALN1Q9BXU9 219 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 SMYD3Q9H7B4 428 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 SNX24Q9Y343 169 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 PFDN6O15212 129 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 POLR2MP0CAP2 368 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 POLA2Q14181 598 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 KRT31Q15323 416 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 ZBTB41Q5SVQ8 909 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 RNF169Q8NCN4 708 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 OSBPL1AQ9BXW6 950 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 PCIF1Q9H4Z3 704 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 IPO11Q9UI26 975 aaKnown RBP17.41■□□□□ 0.38
ITSN1-209ENST00000399352 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 KRT10P13645 584 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 PRPSAP1Q14558 356 aa17.41■□□□□ 0.38
ITSN1-209ENST00000399352 LMNAP02545 664 aaKnown RBP17.4■□□□□ 0.38
ITSN1-209ENST00000399352 RESTQ13127 1097 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 FBXO11Q86XK2 927 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 FGFR1OP2Q9NVK5 253 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 PPP1R12AO14974 1030 aaPredicted RBP17.4■□□□□ 0.38
ITSN1-209ENST00000399352 CHURC1Q8WUH1 139 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 WARS2Q9UGM6 360 aaKnown RBP17.4■□□□□ 0.38
ITSN1-209ENST00000399352 NVLO15381 856 aaKnown RBP17.4■□□□□ 0.38
ITSN1-209ENST00000399352 DNAJC6O75061 913 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 MAGOHP61326 146 aaKnown RBP17.4■□□□□ 0.38
ITSN1-209ENST00000399352 ATG16L1Q676U5 607 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 TRIM11Q96F44 468 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 S100BP04271 92 aaPredicted RBP17.4■□□□□ 0.38
ITSN1-209ENST00000399352 CHGBP05060 677 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 CTSWP56202 376 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 UBE2TQ9NPD8 197 aaPredicted RBP17.4■□□□□ 0.38
ITSN1-209ENST00000399352 STOML1Q9UBI4 398 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 CAPN11Q9UMQ6 739 aa17.4■□□□□ 0.38
ITSN1-209ENST00000399352 IQCB1Q15051 598 aa17.39■□□□□ 0.38
ITSN1-209ENST00000399352 UPF3AQ9H1J1 476 aaKnown RBP17.39■□□□□ 0.38
ITSN1-209ENST00000399352 MLXIPQ9HAP2 919 aa17.39■□□□□ 0.38
ITSN1-209ENST00000399352 UHRF1BP1LA0JNW5 1464 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 LOC102724159A0A0B4J2E5 919 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 USP27XA6NNY8 438 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 CCNE1P24864 410 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 PWP2Q15269 919 aaKnown RBP17.39■□□□□ 0.37
ITSN1-209ENST00000399352 PYROXD1Q8WU10 500 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 RNF26Q9BY78 433 aaPredicted RBP17.39■□□□□ 0.37
ITSN1-209ENST00000399352 NDST4Q9H3R1 872 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 STK17AQ9UEE5 414 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 ZBTB22O15209 634 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 MFSD14BQ5SR56 506 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 PARP9Q8IXQ6 854 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 POLR3CQ9BUI4 534 aaPredicted RBP17.39■□□□□ 0.37
ITSN1-209ENST00000399352 TRIM55Q9BYV6 548 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 THAP9Q9H5L6 903 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 DBNLQ9UJU6 430 aaKnown RBP17.39■□□□□ 0.37
ITSN1-209ENST00000399352 PCDHA4Q9UN74 947 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 TRPM2O94759 1503 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 PALM3A6NDB9 673 aaPredicted RBP17.39■□□□□ 0.37
ITSN1-209ENST00000399352 TMEM232C9JQI7 657 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 SPARCL1Q14515 664 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 SLFNL1Q499Z3 407 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 MB21D1Q8N884 522 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 INPP5FQ9Y2H2 1132 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 PCDHA1Q9Y5I3 950 aa17.39■□□□□ 0.37
ITSN1-209ENST00000399352 MCF2P10911 925 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 TMPRSS15P98073 1019 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 CAPRIN2Q6IMN6 1127 aaKnown RBP17.38■□□□□ 0.37
ITSN1-209ENST00000399352 PAGE5Q96GU1 130 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 UGGT2Q9NYU1 1516 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 GMNCA6NCL1 334 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 ALKBH5Q6P6C2 394 aaKnown RBP17.38■□□□□ 0.37
ITSN1-209ENST00000399352 FAM149B1Q96BN6 582 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 ESYT3A0FGR9 886 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 LAD1O00515 517 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 MMP1P03956 469 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 POLGP54098 1239 aaPredicted RBP17.38■□□□□ 0.37
ITSN1-209ENST00000399352 GTF2IP78347 998 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 C1orf146Q5VVC0 180 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 OCRLQ01968 901 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 RGS9BPQ6ZS82 235 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 DEPDC1BQ8WUY9 529 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 AIFM3Q96NN9 605 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 ZFP69BQ9UJL9 534 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 H0YCG3 227 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 PALMO75781 387 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 SLC4A1P02730 911 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 TCIRG1Q13488 830 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 ZMYM1Q5SVZ6 1142 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 NBPF10Q6P3W6 841 aaKnown RBP17.38■□□□□ 0.37
ITSN1-209ENST00000399352 CRLF3Q8IUI8 442 aa17.38■□□□□ 0.37
ITSN1-209ENST00000399352 M0QZ92 97 aa17.37■□□□□ 0.37
ITSN1-209ENST00000399352 ADORA1P30542 326 aa17.37■□□□□ 0.37
ITSN1-209ENST00000399352 UBXN2AP68543 259 aa17.37■□□□□ 0.37
ITSN1-209ENST00000399352 CDR2Q01850 454 aa17.37■□□□□ 0.37
ITSN1-209ENST00000399352 OCA2Q04671 838 aa17.37■□□□□ 0.37
ITSN1-209ENST00000399352 DNAJC24Q6P3W2 148 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms