RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TAB3Q8N5C8 712 aaPredicted RBP14.52□□□□□ -0.09
NFKB1-202ENST00000394820 EFCC1Q9HA90 598 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 MYO1AQ9UBC5 1043 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 LIMA1Q9UHB6 759 aaKnown RBP14.52□□□□□ -0.09
NFKB1-202ENST00000394820 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 LEMD3Q9Y2U8 911 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 XIRP1Q702N8 1843 aaKnown RBP14.52□□□□□ -0.09
NFKB1-202ENST00000394820 RASA1P20936 1047 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 RBM17Q96I25 401 aaKnown RBP14.52□□□□□ -0.09
NFKB1-202ENST00000394820 ZIM3Q96PE6 472 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 ADAM33Q9BZ11 813 aa14.52□□□□□ -0.09
NFKB1-202ENST00000394820 EEF1GP26641 437 aaKnown RBP14.51□□□□□ -0.09
NFKB1-202ENST00000394820 GNA11P29992 359 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 TM4SF1P30408 202 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 LONP1P36776 959 aaKnown RBP14.51□□□□□ -0.09
NFKB1-202ENST00000394820 EPHB4P54760 987 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 DBNDD1Q9H9R9 158 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 PCDHA6Q9UN73 950 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 KIAA1024Q9UPX6 916 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 PCDHA8Q9Y5H6 950 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 MAP2K7O14733 419 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 EZRP15311 586 aaKnown RBP14.51□□□□□ -0.09
NFKB1-202ENST00000394820 ZNF211Q13398 564 aaPredicted RBP14.51□□□□□ -0.09
NFKB1-202ENST00000394820 NPY5RQ15761 445 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 VPS72Q15906 364 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 USP40Q9NVE5 1235 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 MAD2L2Q9UI95 211 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 CNTNAP4Q9C0A0 1308 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 NEBLO76041 1014 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 SARSP49591 514 aaKnown RBP14.51□□□□□ -0.09
NFKB1-202ENST00000394820 PABPC4Q13310 644 aaKnown RBP eCLIP14.51□□□□□ -0.09
NFKB1-202ENST00000394820 CCDC84Q86UT8 332 aaPredicted RBP14.51□□□□□ -0.09
NFKB1-202ENST00000394820 DGKHQ86XP1 1220 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
NFKB1-202ENST00000394820 COL4A1P02462 1669 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 NPHP3-ACAD11A0A0J9YXS1 232 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 GOLGA8KD6RF30 607 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 LRRN2O75325 713 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 FAM153BP0C7A2 387 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 PLTPP55058 493 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 CORO7P57737 925 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 FAM153CQ494X1 144 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 HIBCHQ6NVY1 386 aaPredicted RBP14.5□□□□□ -0.09
NFKB1-202ENST00000394820 FNBP4Q8N3X1 1017 aaPredicted RBP14.5□□□□□ -0.09
NFKB1-202ENST00000394820 POLLQ9UGP5 575 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 FAM153AQ9UHL3 310 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 SPEF2Q9C093 1822 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 ACTN1P12814 892 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 ADAM9Q13443 819 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 CCDC38Q502W7 563 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 NEK8Q86SG6 692 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 TSEN2Q8NCE0 465 aaKnown RBP14.5□□□□□ -0.09
NFKB1-202ENST00000394820 RNPC3Q96LT9 517 aaKnown RBP14.5□□□□□ -0.09
NFKB1-202ENST00000394820 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.5□□□□□ -0.09
NFKB1-202ENST00000394820 UBXN2AP68543 259 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 TTBK2Q6IQ55 1244 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 MYOCDQ8IZQ8 938 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 ADSSL1Q8N142 457 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 MSANTD4Q8NCY6 345 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 MTRQ99707 1265 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 SNX12Q9UMY4 172 aa14.5□□□□□ -0.09
NFKB1-202ENST00000394820 DDX39AO00148 427 aaKnown RBP14.49□□□□□ -0.09
NFKB1-202ENST00000394820 KIF4AO95239 1232 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 PCP11498 1178 aaKnown RBP14.49□□□□□ -0.09
NFKB1-202ENST00000394820 MCTP2Q6DN12 878 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 GPBP1Q86WP2 473 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 RPGRIP1Q96KN7 1286 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 MTA3Q9BTC8 594 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 FAM237AA0A1B0GTK4 181 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 PHF20L1A8MW92 1017 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 TDP2O95551 362 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 SYF2O95926 243 aaKnown RBP14.49□□□□□ -0.09
NFKB1-202ENST00000394820 CDKAL1Q5VV42 579 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 RETREG2Q8NC44 543 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 MDM1Q8TC05 714 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 AMACRQ9UHK6 382 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 CAPN11Q9UMQ6 739 aa14.49□□□□□ -0.09
NFKB1-202ENST00000394820 REXO2Q9Y3B8 237 aaKnown RBP14.49□□□□□ -0.09
NFKB1-202ENST00000394820 CTNND1O60716 968 aaKnown RBP14.48□□□□□ -0.09
NFKB1-202ENST00000394820 TBCAO75347 108 aaKnown RBP14.48□□□□□ -0.09
NFKB1-202ENST00000394820 AKR1B1P15121 316 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 HNRNPH1P31943 449 aaKnown RBP14.48□□□□□ -0.09
NFKB1-202ENST00000394820 ERFP50548 548 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 RCAN1P53805 252 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 GRM4Q14833 912 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 VWA3BQ502W6 1294 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 EP400NLQ6ZTU2 488 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 TRAPPC11Q7Z392 1133 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 TBC1D1Q86TI0 1168 aaPredicted RBP14.48□□□□□ -0.09
NFKB1-202ENST00000394820 CCDC170Q8IYT3 715 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 ARFGAP2Q8N6H7 521 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 GLIS3Q8NEA6 775 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 LARP4BQ92615 738 aaKnown RBP14.48□□□□□ -0.09
NFKB1-202ENST00000394820 N4BP2L2Q92802 583 aaPredicted RBP14.48□□□□□ -0.09
NFKB1-202ENST00000394820 SERPINA10Q9UK55 444 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 DOT1LQ8TEK3 1739 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 ROBO1Q9Y6N7 1651 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 STRCQ7RTU9 1775 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 CETN3O15182 167 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 EPHB6O15197 1021 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms