RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SYMPKQ92797 1274 aaKnown RBP10.59□□□□□ -0.71
HMGN1-202ENST00000380747 COPS5Q92905 334 aa10.59□□□□□ -0.71
HMGN1-202ENST00000380747 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
HMGN1-202ENST00000380747 FAM161BQ96MY7 647 aa10.59□□□□□ -0.71
HMGN1-202ENST00000380747 TSEN34Q9BSV6 310 aaKnown RBP10.59□□□□□ -0.71
HMGN1-202ENST00000380747 RNF26Q9BY78 433 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-202ENST00000380747 PHF24Q9UPV7 400 aa10.59□□□□□ -0.71
HMGN1-202ENST00000380747 Q9Y3F1 56 aa10.59□□□□□ -0.71
HMGN1-202ENST00000380747 MCM3APO60318 1980 aa10.59□□□□□ -0.71
HMGN1-202ENST00000380747 A0A1W2PQ45 241 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-202ENST00000380747 A0A1W2PQY0 241 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 MOXD2PA6NHM9 499 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 NKRFO15226 690 aaKnown RBP eCLIP10.58□□□□□ -0.72
HMGN1-202ENST00000380747 CTAGE5O15320 804 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 ZEB2O60315 1214 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 PFKFB2O60825 505 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 CDKL5O76039 1030 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 ARIH2O95376 493 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 ASGR1P07306 291 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 CST5P28325 142 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-202ENST00000380747 RTP1P59025 263 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 SCRN1Q12765 414 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 PKN1Q16512 942 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 FSCN1Q16658 493 aaKnown RBP10.58□□□□□ -0.72
HMGN1-202ENST00000380747 LY6KQ17RY6 165 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 C1orf53Q5VUE5 145 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 VSIG10LQ86VR7 867 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 NECAB1Q8N987 351 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 CCDC12Q8WUD4 166 aaPredicted RBP10.58□□□□□ -0.72
HMGN1-202ENST00000380747 PGBD1Q96JS3 809 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 KDM4CQ9H3R0 1056 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 EHMT1Q9H9B1 1298 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 RIC8AQ9NPQ8 531 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 STARD7Q9NQZ5 370 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 PCDHA6Q9UN73 950 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 PCDHA8Q9Y5H6 950 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 MRVI1Q9Y6F6 885 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 LTBP2Q14767 1821 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 FRMPD4Q14CM0 1322 aa10.58□□□□□ -0.72
HMGN1-202ENST00000380747 SORBS3O60504 671 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 DTNBO60941 627 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 DEXIO95424 95 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 LARGE1O95461 756 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 GH1P01241 217 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 MYL3P08590 195 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 RBM25P49756 843 aaKnown RBP10.57□□□□□ -0.72
HMGN1-202ENST00000380747 SHHQ15465 462 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 GNPTABQ3T906 1256 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 TRIM60Q495X7 471 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 CCSAPQ6IQ19 270 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-202ENST00000380747 CCDC62Q6P9F0 684 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 CXCL17Q6UXB2 119 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 SLC39A5Q6ZMH5 540 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 CCDC148Q8NFR7 591 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 GLT1D1Q96MS3 346 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 GLT8D2Q9H1C3 349 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 TTYH1Q9H313 450 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-202ENST00000380747 C6orf50Q9HD87 102 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 TMEM260Q9NX78 707 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 RTEL1Q9NZ71 1219 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 VPS54Q9P1Q0 977 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 ATP11BQ9Y2G3 1177 aa10.57□□□□□ -0.72
HMGN1-202ENST00000380747 STAM2O75886 525 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 RGS20O76081 388 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 CPT1AP50416 773 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 NLRP5P59047 1200 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 NKX3-2P78367 333 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 MRPS9P82933 396 aaKnown RBP10.56□□□□□ -0.72
HMGN1-202ENST00000380747 ARHGAP1Q07960 439 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 ME3Q16798 604 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 BRDTQ58F21 947 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-202ENST00000380747 C9orf50Q5SZB4 431 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 JAKMIP3Q5VZ66 844 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 PCNX4Q63HM2 1172 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 XRRA1Q6P2D8 792 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 KCNV1Q6PIU1 500 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 NLRX1Q86UT6 975 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 DHX37Q8IY37 1157 aaKnown RBP10.56□□□□□ -0.72
HMGN1-202ENST00000380747 KIF2CQ99661 725 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 ANO3Q9BYT9 981 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 DDX41Q9UJV9 622 aaKnown RBP10.56□□□□□ -0.72
HMGN1-202ENST00000380747 LIMCH1Q9UPQ0 1083 aa10.56□□□□□ -0.72
HMGN1-202ENST00000380747 ESYT2A0FGR8 921 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 ADAMTS3O15072 1205 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-202ENST00000380747 HOXB1P14653 301 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-202ENST00000380747 GNA11P29992 359 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 AP3B2Q13367 1082 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 RABEP1Q15276 862 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 AMHR2Q16671 573 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 TEX2Q8IWB9 1127 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 AFG1LQ8WV93 481 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 MYLIPQ8WY64 445 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 GTF3C6Q969F1 213 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 ZMYND12Q9H0C1 365 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 PDLIM7Q9NR12 457 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 POLR3EQ9NVU0 708 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 XIRP2A4UGR9 3374 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
HMGN1-202ENST00000380747 ELP1O95163 1332 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms