RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 KRT12Q99456 494 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 PALMO75781 387 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 LSP1P33241 339 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 HGSNATQ68CP4 663 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 MSL1Q68DK7 614 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 CENPPQ6IPU0 288 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 GBP6Q6ZN66 633 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 IQCKQ8N0W5 287 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 C7orf25Q9BPX7 421 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 PACSIN1Q9BY11 444 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 CENPHQ9H3R5 247 aa13.16□□□□□ -0.3
PRDM2-204ENST00000376048 BACH1O14867 736 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 TLR2O60603 784 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 EPB41P11171 864 aaKnown RBP13.15□□□□□ -0.3
PRDM2-204ENST00000376048 PRLRP16471 622 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 KLRC1P26715 233 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 CDK8P49336 464 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 SKOR1P84550 965 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 ASTE1Q2TB18 679 aaPredicted RBP13.15□□□□□ -0.3
PRDM2-204ENST00000376048 SBK1Q52WX2 424 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 CFAP58Q5T655 872 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 CACNA2D4Q7Z3S7 1137 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 ZNF804AQ7Z570 1209 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 OR2W6PQ8NHA6 318 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 CASKIN2Q8WXE0 1202 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 CAVIN3Q969G5 261 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 EYA3Q99504 573 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 BLOC1S4Q9NUP1 217 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 TMEM260Q9NX78 707 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
PRDM2-204ENST00000376048 POTEMA6NI47 508 aa13.15□□□□□ -0.31
PRDM2-204ENST00000376048 LCA5LO95447 670 aa13.15□□□□□ -0.31
PRDM2-204ENST00000376048 MYL1P05976 194 aa13.15□□□□□ -0.31
PRDM2-204ENST00000376048 HPDP32754 393 aaPredicted RBP13.15□□□□□ -0.31
PRDM2-204ENST00000376048 HSPA1LP34931 641 aa13.15□□□□□ -0.31
PRDM2-204ENST00000376048 ITIH3Q06033 890 aa13.15□□□□□ -0.31
PRDM2-204ENST00000376048 ALS2CLQ60I27 953 aa13.15□□□□□ -0.31
PRDM2-204ENST00000376048 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.31
PRDM2-204ENST00000376048 BIN2Q9UBW5 565 aaPredicted RBP13.15□□□□□ -0.31
PRDM2-204ENST00000376048 GGA1Q9UJY5 639 aa13.15□□□□□ -0.31
PRDM2-204ENST00000376048 FAM170AA1A519 330 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 USP17L5A8MUK1 530 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 PCP11498 1178 aaKnown RBP13.14□□□□□ -0.31
PRDM2-204ENST00000376048 NAPAP54920 295 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 HDLBPQ00341 1268 aaKnown RBP13.14□□□□□ -0.31
PRDM2-204ENST00000376048 EHHADHQ08426 723 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 NAA35Q5VZE5 725 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 KCNK18Q7Z418 384 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 KLHL7Q8IXQ5 586 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 NOX5Q96PH1 765 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 H0YHG0 523 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 GRB10Q13322 594 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 GRM4Q14833 912 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 MAN2A1Q16706 1144 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 CFAP221Q4G0U5 840 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 CNNM4Q6P4Q7 775 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 PDXDC1Q6P996 788 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 TBCKQ8TEA7 893 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 CCDC47Q96A33 483 aaKnown RBP13.14□□□□□ -0.31
PRDM2-204ENST00000376048 FGFBP2Q9BYJ0 223 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 DDX4Q9NQI0 724 aaKnown RBP13.14□□□□□ -0.31
PRDM2-204ENST00000376048 GDF3Q9NR23 364 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 SH3GLB2Q9NR46 395 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 TBC1D7Q9P0N9 293 aa13.14□□□□□ -0.31
PRDM2-204ENST00000376048 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 SMCO2A6NFE2 343 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 BAG3O95817 575 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 NR1D1P20393 614 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 IBSPP21815 317 aaPredicted RBP13.13□□□□□ -0.31
PRDM2-204ENST00000376048 FNTAP49354 379 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 RHBDL3P58872 404 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 SPTY2D1Q68D10 685 aaPredicted RBP13.13□□□□□ -0.31
PRDM2-204ENST00000376048 LRRC55Q6ZSA7 311 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 DDX42Q86XP3 938 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRDM2-204ENST00000376048 OTUD6BQ8N6M0 293 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 PIGSQ96S52 555 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 RAD51CO43502 376 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 IRF5Q13568 498 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 IFT20Q8IY31 132 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 CERS5Q8N5B7 392 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 COA7Q96BR5 231 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 PNMA5Q96PV4 448 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRDM2-204ENST00000376048 PPANQ9NQ55 473 aaKnown RBP13.13□□□□□ -0.31
PRDM2-204ENST00000376048 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
PRDM2-204ENST00000376048 MEFVO15553 781 aaPredicted RBP13.12□□□□□ -0.31
PRDM2-204ENST00000376048 PJA2O43164 708 aa13.12□□□□□ -0.31
PRDM2-204ENST00000376048 NOL4O94818 638 aa13.12□□□□□ -0.31
PRDM2-204ENST00000376048 TAL1P17542 331 aaPredicted RBP13.12□□□□□ -0.31
PRDM2-204ENST00000376048 PRPHP41219 470 aa13.12□□□□□ -0.31
PRDM2-204ENST00000376048 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
PRDM2-204ENST00000376048 CEP85LQ5SZL2 805 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms