RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CABP4P57796 275 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 CRAMP1Q96RY5 1269 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 AFF2P51816 1311 aa12.84□□□□□ -0.35
SMARCA1-201ENST00000371121 EZRP15311 586 aaKnown RBP12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 SLC8A1P32418 973 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 CTNNA1P35221 906 aaKnown RBP12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 TUBP50607 506 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 CDR1P51861 262 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 PFKFB3Q16875 520 aaPredicted RBP12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 COBLL1Q53SF7 1204 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 STAG2Q8N3U4 1231 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 EIF1ADQ8N9N8 165 aaKnown RBP12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 NOX5Q96PH1 765 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 AP1M1Q9BXS5 423 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 PNMA2Q9UL42 364 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 TRAPPC10P48553 1259 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 GALNTL6Q49A17 601 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 AGBL2Q5U5Z8 902 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 FMNL3Q8IVF7 1028 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 CCDC50Q8IVM0 306 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 TMTC2Q8N394 836 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 GPKOWQ92917 476 aaPredicted RBP eCLIP12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 BAIAP2L1Q9UHR4 511 aa12.83□□□□□ -0.36
SMARCA1-201ENST00000371121 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 TCP11Q8WWU5 503 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 XPO6Q96QU8 1125 aaKnown RBP12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 RIOK1Q9BRS2 568 aaKnown RBP12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 CCSER1Q9C0I3 900 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 SCN7AQ01118 1682 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 SSU72P8A0A1W2PR75 194 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 DAPK3O43293 454 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 EDIL3O43854 480 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 AKR1B10O60218 316 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 SCG2P13521 617 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 NCALDP61601 193 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 BIRC3Q13489 604 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 SNX1Q13596 522 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 ERICH1Q86X53 443 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 NOC3LQ8WTT2 800 aaKnown RBP12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 CHMP6Q96FZ7 201 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 FGFBP2Q9BYJ0 223 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 DDX47Q9H0S4 455 aaKnown RBP12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 RNF14Q9UBS8 474 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 GGT7Q9UJ14 662 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 AP1G2O75843 785 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 ALDH5A1P51649 535 aaPredicted RBP12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 IFFO1Q0D2I5 559 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 PPP1R7Q15435 360 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 THEMIS2Q5TEJ8 643 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 C7orf25Q9BPX7 421 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 KANSL2Q9H9L4 492 aa12.82□□□□□ -0.36
SMARCA1-201ENST00000371121 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 A0A1B0GUA9 196 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 IPO7O95373 1038 aaKnown RBP12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 CTSWP56202 376 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 ICA1Q05084 483 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 CYB5RLQ6IPT4 315 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 TBC1D1Q86TI0 1168 aaPredicted RBP12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 ANKS1AQ92625 1134 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 MAGEC2Q9UBF1 373 aaPredicted RBP12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 AMACRQ9UHK6 382 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 NENFQ9UMX5 172 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 ENO4A6NNW6 628 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 KRT16P08779 473 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 MMP13P45452 471 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 PDE4DQ08499 809 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 GKAP1Q5VSY0 366 aaPredicted RBP12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 MAEAQ7L5Y9 396 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 TAX1BP1Q86VP1 789 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 LRRC34Q8IZ02 419 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 CENPTQ96BT3 561 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 ZDHHC18Q9NUE0 388 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 CHN1P15882 459 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 ADCY2Q08462 1091 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 TNFAIP8L3Q5GJ75 292 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 FAM43BQ6ZT52 329 aaPredicted RBP12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 ASRGL1Q7L266 308 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 CNKSR1Q969H4 720 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 UTP4Q969X6 686 aaKnown RBP12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 ZBTB10Q96DT7 871 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 PCMTD1Q96MG8 357 aaPredicted RBP12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 MMRN2Q9H8L6 949 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 BLOC1S4Q9NUP1 217 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 BCCIPQ9P287 314 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 TRIM33Q9UPN9 1127 aa12.81□□□□□ -0.36
SMARCA1-201ENST00000371121 BCAMP50895 628 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 IFI35P80217 286 aaPredicted RBP12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 PLS1Q14651 629 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 NBPF9Q3BBW0 867 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 DCAF12L1Q5VU92 463 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 NLRP10Q86W26 655 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms