RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 LETM2Q2VYF4 491 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 LACTB2Q53H82 288 aaPredicted RBP10.6□□□□□ -0.71
LRRC40-201ENST00000370952 SFMBT2Q5VUG0 894 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 CNNM4Q6P4Q7 775 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 C7orf25Q9BPX7 421 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 RIOK1Q9BRS2 568 aaKnown RBP10.6□□□□□ -0.71
LRRC40-201ENST00000370952 TRIM31Q9BZY9 425 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 DPH5Q9H2P9 285 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 SART1O43290 800 aaKnown RBP10.6□□□□□ -0.71
LRRC40-201ENST00000370952 ITGA4P13612 1032 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 RPS6KA1Q15418 735 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 FAM83BQ5T0W9 1011 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 HEATR3Q7Z4Q2 680 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 TBC1D1Q86TI0 1168 aaPredicted RBP10.6□□□□□ -0.71
LRRC40-201ENST00000370952 NSMCE1Q8WV22 266 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 IQCDQ96DY2 449 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 LSM14BQ9BX40 385 aaKnown RBP10.6□□□□□ -0.71
LRRC40-201ENST00000370952 CELF4Q9BZC1 486 aaKnown RBP10.6□□□□□ -0.71
LRRC40-201ENST00000370952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.6□□□□□ -0.71
LRRC40-201ENST00000370952 AMACRQ9UHK6 382 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 CCDC88AQ3V6T2 1871 aa10.6□□□□□ -0.71
LRRC40-201ENST00000370952 FAM170AA1A519 330 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CTNND1O60716 968 aaKnown RBP10.59□□□□□ -0.71
LRRC40-201ENST00000370952 TRIM37O94972 964 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CLSTN1O94985 981 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 IFFO1Q0D2I5 559 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 BIRC3Q13489 604 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 FMNL3Q8IVF7 1028 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 FAM133AQ8N9E0 248 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 MAGEC3Q8TD91 643 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CUL5Q93034 780 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 KCNG1Q9UIX4 513 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 PNMA2Q9UL42 364 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 PCDHGC5Q9Y5F6 944 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 ARAP2Q8WZ64 1704 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 MYMKA6NI61 221 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 PPIP5K2O43314 1243 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 ORC4O43929 436 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CCNT1O60563 726 aaKnown RBP10.59□□□□□ -0.71
LRRC40-201ENST00000370952 DNAJC8O75937 253 aaPredicted RBP10.59□□□□□ -0.71
LRRC40-201ENST00000370952 NOL4O94818 638 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
LRRC40-201ENST00000370952 GYG1P46976 350 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 DHX9Q08211 1270 aaKnown RBP10.59□□□□□ -0.71
LRRC40-201ENST00000370952 FAM133BQ5BKY9 247 aaKnown RBP10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CCDC63Q8NA47 563 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 RSRC1Q96IZ7 334 aaKnown RBP10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CPVLQ9H3G5 476 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 GGT7Q9UJ14 662 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 TMEM59LQ9UK28 342 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 TSPY2A6NKD2 308 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 SMIM23A6NLE4 172 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CCT8L1PA6NM43 557 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 RBAK-RBAKDNI3L0D1 243 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 SERPING1P05155 500 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 PEX19P40855 299 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CUL1Q13616 776 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 AGBL2Q5U5Z8 902 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CCDC197Q8NCU1 140 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 C3orf20Q8ND61 904 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 ANKS1AQ92625 1134 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 XPO6Q96QU8 1125 aaKnown RBP10.59□□□□□ -0.71
LRRC40-201ENST00000370952 PSMD1Q99460 953 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 SELENOSQ9BQE4 189 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 DLEC1Q9Y238 1755 aa10.59□□□□□ -0.71
LRRC40-201ENST00000370952 CICQ96RK0 1608 aaPredicted RBP10.58□□□□□ -0.72
LRRC40-201ENST00000370952 M0R2N6 131 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 TTI1O43156 1089 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 CAND2O75155 1236 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 KIF4AO95239 1232 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 PAEPP09466 180 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 OR52Z1P0C646 297 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 SLC18A3Q16572 532 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 LRRC55Q6ZSA7 311 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 TBC1D22AQ8WUA7 517 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 CHMP6Q96FZ7 201 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 MMTAG2Q9BU76 263 aaKnown RBP10.58□□□□□ -0.72
LRRC40-201ENST00000370952 KDM4CQ9H3R0 1056 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 ATP8A1Q9Y2Q0 1164 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 NOC2LQ9Y3T9 749 aaKnown RBP10.58□□□□□ -0.72
LRRC40-201ENST00000370952 ATP6V0A2Q9Y487 856 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 GCKP35557 465 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 KLHL30Q0D2K2 578 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 SLC35G1Q2M3R5 365 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 RCSD1Q6JBY9 416 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 TMC3Q7Z5M5 1100 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 MTFR1LQ9H019 292 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 CUEDC2Q9H467 287 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 LUC7LQ9NQ29 371 aaKnown RBP10.58□□□□□ -0.72
LRRC40-201ENST00000370952 TMOD3Q9NYL9 352 aa10.58□□□□□ -0.72
LRRC40-201ENST00000370952 TLDC2A0PJX2 215 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 F8VZ95 297 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 KRIT1O00522 736 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 ANP32DO95626 131 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 CHN1P15882 459 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 TXKP42681 527 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 AMPD3Q01432 767 aa10.57□□□□□ -0.72
LRRC40-201ENST00000370952 TMED8Q6PL24 325 aaPredicted RBP10.57□□□□□ -0.72
LRRC40-201ENST00000370952 ZNF384Q8TF68 577 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms