RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 MED1Q15648 1581 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-206ENST00000368215 GFPT2O94808 682 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 KCNJ6P48051 423 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 GFPT1Q06210 699 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-206ENST00000368215 PSMD2Q13200 908 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 PPP1R7Q15435 360 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 ZSCAN26Q16670 478 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 CDC42EP5Q6NZY7 148 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 GSPT2Q8IYD1 628 aaKnown RBP9.28□□□□□ -0.92
PTPRK-206ENST00000368215 ZMYND12Q9H0C1 365 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 PVALEFA0A1B0GWK0 134 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 ANKRD62A6NC57 917 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 BCRP11274 1271 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 BMP6P22004 513 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 POLD1P28340 1107 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 PLCB3Q01970 1234 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 SEL1L2Q5TEA6 688 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 TTC19Q6DKK2 380 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-206ENST00000368215 NLRX1Q86UT6 975 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 PPM1KQ8N3J5 372 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 GOLGA6L7A0A1B0GV03 622 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 KRIT1O00522 736 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 RHOBTB3O94955 611 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 ATP1A2P50993 1020 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 MCTP2Q6DN12 878 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 CCDC155Q8N6L0 562 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 DPH5Q9H2P9 285 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 SYNCQ9H7C4 482 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 GCNT4Q9P109 453 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 AMFRQ9UKV5 643 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 BCS1LQ9Y276 419 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 JRKLQ9Y4A0 524 aa9.28□□□□□ -0.92
PTPRK-206ENST00000368215 ATP1A1P05023 1023 aaKnown RBP9.27□□□□□ -0.93
PTPRK-206ENST00000368215 DLATP10515 647 aaKnown RBP9.27□□□□□ -0.93
PTPRK-206ENST00000368215 PPP4CP60510 307 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 CASP8Q14790 479 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 ARHGEF16Q5VV41 709 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 KCTD16Q68DU8 428 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 GSTA5Q7RTV2 222 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 CCDC114Q96M63 670 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
PTPRK-206ENST00000368215 NCK2O43639 380 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 MICALCLQ6ZW33 695 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 GUF1Q8N442 669 aaKnown RBP9.27□□□□□ -0.93
PTPRK-206ENST00000368215 LRRN4CLQ8ND94 238 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 IFT74Q96LB3 600 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 FAM184BQ9ULE4 1060 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 MRC1P22897 1456 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 NFIAQ12857 509 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 GRIPAP1Q4V328 841 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 WDR44Q5JSH3 913 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 MICALL1Q8N3F8 863 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 RTFDC1Q9BY42 306 aaPredicted RBP9.27□□□□□ -0.93
PTPRK-206ENST00000368215 FAM204AQ9H8W3 233 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 JMJD4Q9H9V9 463 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 SCAF8Q9UPN6 1271 aaKnown RBP9.27□□□□□ -0.93
PTPRK-206ENST00000368215 UTP11Q9Y3A2 253 aaKnown RBP9.27□□□□□ -0.93
PTPRK-206ENST00000368215 RGPD2P0DJD1 1756 aa9.27□□□□□ -0.93
PTPRK-206ENST00000368215 WNT7AO00755 349 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 NDUFAB1O14561 156 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 SLC37A4O43826 429 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 GYS1P13807 737 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 TERF2Q15554 542 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 RCSD1Q6JBY9 416 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 GIMAP8Q8ND71 665 aaPredicted RBP9.26□□□□□ -0.93
PTPRK-206ENST00000368215 DCAF4Q8WV16 495 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 CRAMP1Q96RY5 1269 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 EPB41L5Q9HCM4 733 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 RGL1Q9NZL6 768 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 MTUS1Q9ULD2 1270 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 CAPN11Q9UMQ6 739 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 EXOC7Q9UPT5 735 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 RGPD1P0DJD0 1748 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 EIF2AK2P19525 551 aaKnown RBP9.26□□□□□ -0.93
PTPRK-206ENST00000368215 PSMC2P35998 433 aaKnown RBP9.26□□□□□ -0.93
PTPRK-206ENST00000368215 MAP3K9P80192 1104 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 KCNH2Q12809 1159 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 PAIP2Q9BPZ3 127 aaKnown RBP9.26□□□□□ -0.93
PTPRK-206ENST00000368215 HEXIM1O94992 359 aaKnown RBP9.26□□□□□ -0.93
PTPRK-206ENST00000368215 SERPING1P05155 500 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 TNNI1P19237 187 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 GBP2P32456 591 aaPredicted RBP9.26□□□□□ -0.93
PTPRK-206ENST00000368215 PDXDC2PQ6P474 469 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 NFRKBQ6P4R8 1299 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 SYCE1Q8N0S2 351 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 PARVGQ9HBI0 331 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 TMOD4Q9NZQ9 345 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 USTQ9Y2C2 406 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 TACC3Q9Y6A5 838 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 A0A1W2PQC6 194 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 ZNF185O15231 689 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 ZNF18P17022 549 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 CALCOCO2Q13137 446 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 SLC27A3Q5K4L6 730 aa9.26□□□□□ -0.93
PTPRK-206ENST00000368215 ELOA2Q8IYF1 753 aaPredicted RBP9.26□□□□□ -0.93
PTPRK-206ENST00000368215 MTRF1LQ9UGC7 380 aaKnown RBP9.26□□□□□ -0.93
PTPRK-206ENST00000368215 ATP8B1O43520 1251 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 SARSP49591 514 aaKnown RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 ERVK-24P63145 666 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 MYL7Q01449 175 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms