RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 RNF219Q5W0B1 726 aaPredicted RBP22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 KRT1P04264 644 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 SZRD1Q7Z422 152 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 BBS5Q8N3I7 341 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 CELF1Q92879 486 aaKnown RBP22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 GJD4Q96KN9 370 aaPredicted RBP22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 CARMIL3Q8ND23 1372 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 K7ERI5 159 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 LMNB1P20700 586 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 CYFIP1Q7L576 1253 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 PPFIBP2Q8ND30 876 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 OR8K1Q8NGG5 319 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 ERBB3P21860 1342 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 RPS6KA4O75676 772 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 ATP1A2P50993 1020 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 APOA5Q6Q788 366 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 TMC4Q7Z404 712 aa22.02■■□□□ 1.12
CDC42BPB-201ENST00000361246 ATICP31939 592 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 MMEL1Q495T6 779 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 SLC8A2Q9UPR5 921 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 GOLGA8CPA6NN73 597 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 RBM6P78332 1123 aaKnown RBP22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 HABP4Q5JVS0 413 aaKnown RBP22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 SAR1BQ9Y6B6 198 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 PLA2G4BP0C869 781 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 EXOC8Q8IYI6 725 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 GRK7Q8WTQ7 553 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 JPH2Q9BR39 696 aaPredicted RBP22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 CHD1O14646 1710 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 ATP8B3O60423 1300 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 AFPP02771 609 aaKnown RBP22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 CYP21A2P08686 494 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 BRD3Q15059 726 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 GLYCTKQ8IVS8 523 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 COL15A1P39059 1388 aa22.01■■□□□ 1.11
CDC42BPB-201ENST00000361246 NEMP1O14524 444 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 MCAMP43121 646 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 WDR11Q9BZH6 1224 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 MINPP1Q9UNW1 487 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 PCDHA6Q9UN73 950 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 PCDHA8Q9Y5H6 950 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 MYO1FO00160 1098 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 PCK1P35558 622 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 ARHGEF12Q9NZN5 1544 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 PIK3R2O00459 728 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 NSUN2Q08J23 767 aaKnown RBP eCLIP22■■□□□ 1.11
CDC42BPB-201ENST00000361246 TUBGCP2Q9BSJ2 902 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 G3BP2Q9UN86 482 aaKnown RBP22■■□□□ 1.11
CDC42BPB-201ENST00000361246 HOXD10P28358 340 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 MFSD14CQ5VZR4 134 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22■■□□□ 1.11
CDC42BPB-201ENST00000361246 LSG1Q9H089 658 aaKnown RBP22■■□□□ 1.11
CDC42BPB-201ENST00000361246 TMEM260Q9NX78 707 aa22■■□□□ 1.11
CDC42BPB-201ENST00000361246 BASP1P80723 227 aaKnown RBP21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 PDE1BQ01064 536 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 TXNRD1Q16881 649 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 ANKRD20A3Q5VUR7 823 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 PNMA6FA0A0J9YX94 578 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 NVLO15381 856 aaKnown RBP21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 STXBP2Q15833 593 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L15C9J2P7 530 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L13C9JLJ4 530 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L11C9JVI0 530 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L18D6R9N7 530 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L22D6RA61 530 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L17D6RBQ6 530 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L19D6RCP7 530 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L20D6RJB6 530 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 PLCG1P19174 1290 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L24Q0WX57 530 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 DCAF4L1Q3SXM0 396 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 RC3H1Q5TC82 1133 aaKnown RBP21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 ZNF449Q6P9G9 518 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L6PQ6QN14 398 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 THEM5Q8N1Q8 247 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 BAG2O95816 211 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 TTLL11Q8NHH1 800 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 MMTAG2Q9BU76 263 aaKnown RBP21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 ASNSP08243 561 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 URGCPQ8TCY9 931 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 SPATA33Q96N06 139 aa21.99■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP17L10C9JJH3 530 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 THOC5Q13769 683 aaKnown RBP21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 DNAJC17Q9NVM6 304 aaKnown RBP21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 ZBTB12Q9Y330 459 aaPredicted RBP21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 USP6P35125 1406 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 COPB1P53618 953 aaKnown RBP21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 AXIN2Q9Y2T1 843 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 FASTKD5Q7L8L6 764 aaKnown RBP21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 CDHR1Q96JP9 859 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 PARVGQ9HBI0 331 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 GARSP41250 739 aaKnown RBP21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 TMEM62Q0P6H9 643 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 DNAJC24Q6P3W2 148 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 FAM160B2Q86V87 743 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 RASEFQ8IZ41 740 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 N4BP2L2Q92802 583 aaPredicted RBP21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 DACT3Q96B18 629 aaPredicted RBP21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 SPON1Q9HCB6 807 aa21.98■■□□□ 1.11
CDC42BPB-201ENST00000361246 TRPC7Q9HCX4 862 aa21.98■■□□□ 1.11
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