RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SLC7A4O43246 635 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 SRFP11831 508 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 RRM1P23921 792 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 HOXD10P28358 340 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 SLC14A2Q15849 920 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 FAM110CQ1W6H9 321 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 NEIL1Q96FI4 390 aaPredicted RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 LMAN2LQ9H0V9 348 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 PRKRIP1Q9H875 184 aaPredicted RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 CNTD2Q9H8S5 307 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 C19orf53Q9UNZ5 99 aaPredicted RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 LOC285556D6RIA3 1793 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 NKTRP30414 1462 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 H3BRJ5 948 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 M0R2C6 588 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 NPC1O15118 1278 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 DLGAP3O95886 979 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 MYF5P13349 255 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 ATP2A2P16615 1042 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 TNFAIP3P21580 790 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 HOXD12P35452 270 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 ARHGAP8P85298 464 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 TROQ12816 1431 aaPredicted RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 CCAR1Q8IX12 1150 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 DRC7Q8IY82 874 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 INSM2Q96T92 566 aaPredicted RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 NKIRAS2Q9NYR9 191 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 KDRP35968 1356 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 TTC21BQ7Z4L5 1316 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 A0A087WV62 115 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 LCHNA4D1U4 455 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 NRDCO43847 1150 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 AMY2AP04746 511 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 AMY2BP19961 511 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 GJA4P35212 333 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 TRAPPC10P48553 1259 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 CYP4A11Q02928 519 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 COASYQ13057 564 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 SEPT6Q14141 434 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 LCE2CQ5TA81 110 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 ZKSCAN2Q63HK3 967 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 KLHDC10Q6PID8 442 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 APOA5Q6Q788 366 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 CCDC81Q6ZN84 652 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 EEPD1Q7L9B9 569 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 PNMA1Q8ND90 353 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 TTLL11Q8NHH1 800 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 CENPOQ9BU64 300 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 RSPH9Q9H1X1 276 aaPredicted RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 EMC7Q9NPA0 242 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 DUOX1Q9NRD9 1551 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 PRG4Q92954 1404 aaPredicted RBP2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 ERBINQ96RT1 1412 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 LTN1O94822 1766 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 CA12O43570 354 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 LTFP02788 710 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 MYL3P08590 195 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 L1CAMP32004 1257 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 PIK3CBP42338 1070 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 RTKN2Q8IZC4 609 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 TEX9Q8N6V9 391 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 GRIN3AQ8TCU5 1115 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 JADE3Q92613 823 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 ZMAT4Q9H898 229 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 TANC1Q9C0D5 1861 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 ATRNL1Q5VV63 1379 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 KDM3BQ7LBC6 1761 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 THSD7BQ9C0I4 1608 aa2.37□□□□□ -2.03
SMARCAD1-202ENST00000359052 BRINP1O60477 761 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 C5AR1P21730 350 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 HOXD13P35453 343 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 SKOR2Q2VWA4 1001 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 UBXN11Q5T124 520 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 DIS3LQ8TF46 1054 aaKnown RBP2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 TSPEARQ8WU66 669 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 SKA1Q96BD8 255 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 ACSF2Q96CM8 615 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 MFSD14AQ96MC6 490 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 NLRC4Q9NPP4 1024 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 SEPT9Q9UHD8 586 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 AATKQ6ZMQ8 1374 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 CNTNAP4Q9C0A0 1308 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 PMM2O15305 246 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 SFTPCP11686 197 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 ZSCAN20P17040 1043 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 TBXAS1P24557 533 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 SRGAP1Q7Z6B7 1085 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 GOLM1Q8NBJ4 401 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 RDH13Q8NBN7 331 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 RNF217Q8TC41 542 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 RFFLQ8WZ73 363 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 MAML1Q92585 1016 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 LRRC27Q9C0I9 530 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 SMURF2Q9HAU4 748 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 SUCOQ9UBS9 1254 aaKnown RBP2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 TPCN1Q9ULQ1 816 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 TRIM33Q9UPN9 1127 aa2.36□□□□□ -2.03
SMARCAD1-202ENST00000359052 TDRD9Q8NDG6 1382 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms