RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ART3Q13508 389 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 SCG3Q8WXD2 468 aaKnown RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 CNKSR1Q969H4 720 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 SP110Q9HB58 689 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 GALNT8Q9NY28 637 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 KIAA1468Q9P260 1216 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 PNMA3Q9UL41 463 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 KCNJ14Q9UNX9 436 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 WDR91A4D1P6 747 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 AKT1P31749 480 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 BTDP43251 543 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 TCEA2Q15560 299 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ARL13BQ3SXY8 428 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 SLC10A5Q5PT55 438 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 NOSTRINQ8IVI9 506 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 EXOC8Q8IYI6 725 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 TBC1D19Q8N5T2 526 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 IGSF22Q8N9C0 903 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 RNASE11Q8TAA1 199 aaKnown RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 ASZ1Q8WWH4 475 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 SSH1Q8WYL5 1049 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 IWS1Q96ST2 819 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 RSPH9Q9H1X1 276 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-203ENST00000357654 DACT1Q9NYF0 836 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 RIPOR2Q9Y4F9 1068 aa6.26□□□□□ -1.41
BRCA1-203ENST00000357654 FRMD3A2A2Y4 597 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 EFCAB8A8MWE9 144 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 DNAJC8O75937 253 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 RASSF2P50749 326 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 MAP3K21Q5TCX8 1036 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 ERAP2Q6P179 960 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 CCDC90BQ9GZT6 254 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 TMEM161AQ9NX61 479 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 FPGT-TNNI3KV9GXZ4 949 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 SYNRGQ9UMZ2 1314 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 ARHGEF37A1IGU5 675 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 DFFAO00273 331 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 FYNP06241 537 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 GNAT1P11488 350 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 COPB2P35606 906 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 GRIK1P39086 918 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 TIMM10P62072 90 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 RPS6KA1Q15418 735 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 FAM178BQ8IXR5 827 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 ARFGAP2Q8N6H7 521 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 NELFBQ8WX92 580 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 PHKBQ93100 1093 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 CENPKQ9BS16 269 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 SLC25A13Q9UJS0 675 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 AMFRQ9UKV5 643 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 WDR17Q8IZU2 1322 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 PLCH2O75038 1416 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 SKIP12755 728 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 VCAM1P19320 739 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 HSD3B2P26439 372 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 CACNB1Q02641 598 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 FSCBQ5H9T9 825 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 KLC3Q6P597 504 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 MAP3K15Q6ZN16 1313 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 MMS22LQ6ZRQ5 1243 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 SLC7A3Q8WY07 619 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 L3MBTL3Q96JM7 780 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 TSEN34Q9BSV6 310 aaKnown RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 SENP2Q9HC62 589 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 RPRD1BQ9NQG5 326 aaKnown RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 DONSONQ9NYP3 566 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 COBLO75128 1261 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 KRT1P04264 644 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 ZSCAN22P10073 491 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 AKAP5P24588 427 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 MAP4P27816 1152 aaKnown RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 MCM4P33991 863 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 PAK1Q13153 545 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 ANKRD40Q6AI12 368 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 PCGF5Q86SE9 256 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 MAP7D3Q8IWC1 876 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 GIPC2Q8TF65 315 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 OTUD5Q96G74 571 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 CEP170P1Q96L14 293 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 EIF2AQ9BY44 585 aaKnown RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 EPS15L1Q9UBC2 864 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 NDOR1Q9UHB4 597 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 PAIP2BQ9ULR5 123 aaKnown RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 SYCE1LA8MT33 242 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 SRGAP2O75044 1071 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 GCKP35557 465 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 NSFP46459 744 aaKnown RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 NCALDP61601 193 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 TRIP13Q15645 432 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 CCDC92Q53HC0 331 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 ATG16L1Q676U5 607 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 RD3Q7Z3Z2 195 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 DDX42Q86XP3 938 aaKnown RBP eCLIP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 WDR75Q8IWA0 830 aaKnown RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 RGL4Q8IZJ4 473 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 SYCE1Q8N0S2 351 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 STX19Q8N4C7 294 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 GPKOWQ92917 476 aaPredicted RBP eCLIP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 STN1Q9H668 368 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms