RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 STK11IPQ8N1F8 1099 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 NME8Q8N427 588 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 SAMD3Q8N6K7 520 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 CASKIN2Q8WXE0 1202 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 GATA6Q92908 595 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 DHTKD1Q96HY7 919 aaPredicted RBP7.53□□□□□ -1.2
MSR1-202ENST00000350896 CAPZA3Q96KX2 299 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 TCEANC2Q96MN5 208 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 BARX2Q9UMQ3 279 aaPredicted RBP7.53□□□□□ -1.2
MSR1-202ENST00000350896 NFU1Q9UMS0 254 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 SYNPO2Q9UMS6 1093 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 USP20Q9Y2K6 914 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 TAF6LQ9Y6J9 622 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 CCDC61Q9Y6R9 512 aa7.53□□□□□ -1.2
MSR1-202ENST00000350896 ATRNO75882 1429 aa7.52□□□□□ -1.2
MSR1-202ENST00000350896 MYH7P12883 1935 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 TIAM2Q8IVF5 1701 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 A0A0U1RQJ8 604 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 WASLO00401 505 aaPredicted RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 ENC1O14682 589 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 CYP27B1O15528 508 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 VCAM1P19320 739 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 CARSP49589 748 aaKnown RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 SESN3P58005 492 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 XIAPP98170 497 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 RNASELQ05823 741 aaKnown RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 CTDSPL2Q05D32 466 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 TBC1D9BQ66K14 1250 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 TMEM154Q6P9G4 183 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 TBC1D1Q86TI0 1168 aaPredicted RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 RSPH3Q86UC2 560 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 CCDC84Q86UT8 332 aaPredicted RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.52□□□□□ -1.21
MSR1-202ENST00000350896 SCFD2Q8WU76 684 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 PAGE5Q96GU1 130 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 CCDC42Q96M95 316 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 INPP4AQ96PE3 977 aaPredicted RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 CHP1Q99653 195 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 PRDM16Q9HAZ2 1276 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 GALNT8Q9NY28 637 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 DBF4Q9UBU7 674 aaPredicted RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 STXBP5LQ9Y2K9 1186 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 SH3GLB1Q9Y371 365 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 PCDHA13Q9Y5I0 950 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 STK24Q9Y6E0 443 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 NWD1Q149M9 1564 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 DIP2CQ9Y2E4 1556 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 NWD2Q9ULI1 1742 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 RBM47A0AV96 593 aaKnown RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 BICDL2A1A5D9 508 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 POLR2DO15514 142 aaKnown RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 CTNND1O60716 968 aaKnown RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 GLI1P08151 1106 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 PARP1P09874 1014 aaKnown RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 LIFRP42702 1097 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 UBXN1Q04323 297 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 ODF2Q5BJF6 829 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 SEPT14Q6ZU15 432 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 RAB11FIP4Q86YS3 637 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 CROCCP3Q8IVE0 287 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 USP38Q8NB14 1042 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 ZNF398Q8TD17 642 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 IFT81Q8WYA0 676 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 ZNF333Q96JL9 665 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 POLR3CQ9BUI4 534 aaPredicted RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 TLR10Q9BXR5 811 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 IFIH1Q9BYX4 1025 aaKnown RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 UNC45AQ9H3U1 944 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 CCDC87Q9NVE4 849 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.52□□□□□ -1.21
MSR1-202ENST00000350896 NOC2LQ9Y3T9 749 aaKnown RBP7.52□□□□□ -1.21
MSR1-202ENST00000350896 RREB1Q92766 1687 aa7.52□□□□□ -1.21
MSR1-202ENST00000350896 ATAD5Q96QE3 1844 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 IGF2BP3O00425 579 aaKnown RBP eCLIP7.51□□□□□ -1.21
MSR1-202ENST00000350896 SRGAP2O75044 1071 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 DDX58O95786 925 aaKnown RBP7.51□□□□□ -1.21
MSR1-202ENST00000350896 STAT6P42226 847 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 TRAPPC10P48553 1259 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 INHBCP55103 352 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 MTHFSDQ2M296 383 aaKnown RBP7.51□□□□□ -1.21
MSR1-202ENST00000350896 SLC35B4Q969S0 331 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 TEKT1Q969V4 418 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 RUNDC3BQ96NL0 473 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 GBP5Q96PP8 586 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 SYT15Q9BQS2 421 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 SPATA16Q9BXB7 569 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 CUEDC2Q9H467 287 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 DDX21Q9NR30 783 aaKnown RBP eCLIP7.51□□□□□ -1.21
MSR1-202ENST00000350896 RBM12Q9NTZ6 932 aaKnown RBP7.51□□□□□ -1.21
MSR1-202ENST00000350896 USP40Q9NVE5 1235 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 MAGEC2Q9UBF1 373 aaPredicted RBP7.51□□□□□ -1.21
MSR1-202ENST00000350896 PARP2Q9UGN5 583 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 LNPEPQ9UIQ6 1025 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 SRCAPQ6ZRS2 3230 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 WNK3Q9BYP7 1800 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 KDM4FA0A1W2PPD8 638 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 PLEKHG3A1L390 1219 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 GOLGA8BA8MQT2 603 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 F8VZ95 297 aa7.51□□□□□ -1.21
MSR1-202ENST00000350896 IPO5O00410 1097 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms