RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ZSCAN29Q8IWY8 852 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-202ENST00000339570 TLDC2A0PJX2 215 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 COASYQ13057 564 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 FAM26FQ5R3K3 315 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 ZMYND12Q9H0C1 365 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 SH3GLB2Q9NR46 395 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 COL4A3BPQ9Y5P4 624 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 PALM3A6NDB9 673 aaPredicted RBP17.74■□□□□ 0.43
SCARB1-202ENST00000339570 SFI1A8K8P3 1242 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 BAG3O95817 575 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 HGSNATQ68CP4 663 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 LINC00116Q8NCU8 138 aa17.74■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L15C9J2P7 530 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L13C9JLJ4 530 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L11C9JVI0 530 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L18D6R9N7 530 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L22D6RA61 530 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L17D6RBQ6 530 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L19D6RCP7 530 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L20D6RJB6 530 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 SHOX2O60902 331 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-202ENST00000339570 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
SCARB1-202ENST00000339570 ABCB4P21439 1286 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 FLT3P36888 993 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L24Q0WX57 530 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 USP17L6PQ6QN14 398 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 HGSO14964 777 aaPredicted RBP17.73■□□□□ 0.43
SCARB1-202ENST00000339570 ITGA4P13612 1032 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 CTNNA1P35221 906 aaKnown RBP17.73■□□□□ 0.43
SCARB1-202ENST00000339570 ADAM9Q13443 819 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 LRRC55Q6ZSA7 311 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 GPBP1Q86WP2 473 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 AK8Q96MA6 479 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 AMACRQ9UHK6 382 aa17.73■□□□□ 0.43
SCARB1-202ENST00000339570 GNPATO15228 680 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 CLIC2O15247 247 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 ADCY7P51828 1080 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 CYP4A11Q02928 519 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 RPS6KA1Q15418 735 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 ASIC2Q16515 512 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 RAD54LQ92698 747 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 CHORDC1Q9UHD1 332 aaPredicted RBP17.72■□□□□ 0.43
SCARB1-202ENST00000339570 FAM196BA6NMK8 535 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 KCNV1Q6PIU1 500 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 CEP57Q86XR8 500 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 LRRC4CQ9HCJ2 640 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 DISP2A7MBM2 1401 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 A0A1W2PQJ5 194 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 ZNF473Q8WTR7 871 aaKnown RBP17.72■□□□□ 0.43
SCARB1-202ENST00000339570 CCT8L2Q96SF2 557 aa17.72■□□□□ 0.43
SCARB1-202ENST00000339570 DCDC2CA8MYV0 355 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 ECM2O94769 699 aaPredicted RBP17.71■□□□□ 0.43
SCARB1-202ENST00000339570 NOL4O94818 638 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 PTK2Q05397 1052 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 SF3B2Q13435 895 aaKnown RBP17.71■□□□□ 0.43
SCARB1-202ENST00000339570 DPP8Q6V1X1 898 aaPredicted RBP17.71■□□□□ 0.43
SCARB1-202ENST00000339570 SH3GL2Q99962 352 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 DDX25Q9UHL0 483 aaKnown RBP17.71■□□□□ 0.43
SCARB1-202ENST00000339570 POTEFA5A3E0 1075 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 FGFR1OPO95684 399 aaKnown RBP17.71■□□□□ 0.43
SCARB1-202ENST00000339570 MYL1P05976 194 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 POTEIP0CG38 1075 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 ERVK-9P63128 1117 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 FKBP3Q00688 224 aaKnown RBP17.71■□□□□ 0.43
SCARB1-202ENST00000339570 PABPC4Q13310 644 aaKnown RBP eCLIP17.71■□□□□ 0.436e-20■□□□□ 9.8
SCARB1-202ENST00000339570 SBK1Q52WX2 424 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 POTEGQ6S5H5 508 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 POTEEQ6S8J3 1075 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 CCDC113Q9H0I3 377 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 BMP2KQ9NSY1 1161 aaPredicted RBP17.71■□□□□ 0.43
SCARB1-202ENST00000339570 PCDHA12Q9UN75 941 aa17.71■□□□□ 0.43
SCARB1-202ENST00000339570 NOVA2Q9UNW9 492 aaKnown RBP17.71■□□□□ 0.43
SCARB1-202ENST00000339570 GRID2IPA4D2P6 1211 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 RIMBP2O15034 1052 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 DAPK3O43293 454 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 GUCY2CP25092 1073 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 PRPHP41219 470 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 ALS2CLQ60I27 953 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 GUF1Q8N442 669 aaKnown RBP17.7■□□□□ 0.42
SCARB1-202ENST00000339570 MDM1Q8TC05 714 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 NEUROG2Q9H2A3 272 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 CUEDC2Q9H467 287 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 PCDHB13Q9Y5F0 798 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 CACNA1SQ13698 1873 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 GOLGA6L7A0A1B0GV03 622 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 LAD1O00515 517 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 NBPF9Q3BBW0 867 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 KSR1Q8IVT5 923 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 ATP6V0A2Q9Y487 856 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 BCORQ6W2J9 1755 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 SERPING1P05155 500 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 NR2F2P24468 414 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 CASP5P51878 434 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 KCNH2Q12809 1159 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 NLRP14Q86W24 1093 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 PIK3R5Q8WYR1 880 aa17.7■□□□□ 0.42
SCARB1-202ENST00000339570 RTCBQ9Y3I0 505 aaKnown RBP17.7■□□□□ 0.42
SCARB1-202ENST00000339570 KRIT1O00522 736 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms