RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 LGALS2P05162 132 aa28.19■■■□□ 2.1
CDKN3-202ENST00000335183 RSPH10BP0C881 870 aa28.19■■■□□ 2.1
CDKN3-202ENST00000335183 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.19■■■□□ 2.1
CDKN3-202ENST00000335183 TGS1Q96RS0 853 aaKnown RBP28.19■■■□□ 2.1
CDKN3-202ENST00000335183 SMIM10L2AP0DMW4 78 aa28.18■■■□□ 2.1
CDKN3-202ENST00000335183 SMIM10L2BP0DMW5 78 aa28.18■■■□□ 2.1
CDKN3-202ENST00000335183 DBF4BQ8NFT6 615 aa28.18■■■□□ 2.1
CDKN3-202ENST00000335183 SUGCTQ9HAC7 445 aa28.18■■■□□ 2.1
CDKN3-202ENST00000335183 RTEL1Q9NZ71 1219 aa28.18■■■□□ 2.1
CDKN3-202ENST00000335183 RAPGEFL1Q9UHV5 662 aa28.18■■■□□ 2.1
CDKN3-202ENST00000335183 ERVK-21P61565 698 aa28.17■■■□□ 2.1
CDKN3-202ENST00000335183 MRPS9P82933 396 aaKnown RBP28.17■■■□□ 2.1
CDKN3-202ENST00000335183 MYOCDQ8IZQ8 938 aa28.17■■■□□ 2.1
CDKN3-202ENST00000335183 LMCD1Q9NZU5 365 aa28.17■■■□□ 2.1
CDKN3-202ENST00000335183 TREHO43280 583 aa28.16■■■□□ 2.1
CDKN3-202ENST00000335183 AMHP03971 560 aa28.16■■■□□ 2.1
CDKN3-202ENST00000335183 ANTXR2P58335 489 aa28.16■■■□□ 2.1
CDKN3-202ENST00000335183 NEDD9Q14511 834 aa28.16■■■□□ 2.1
CDKN3-202ENST00000335183 CYFIP1Q7L576 1253 aa28.16■■■□□ 2.1
CDKN3-202ENST00000335183 SMARCC2Q8TAQ2 1214 aa28.16■■■□□ 2.1
CDKN3-202ENST00000335183 RNPEPQ9H4A4 650 aa28.16■■■□□ 2.1
CDKN3-202ENST00000335183 FRMPD4Q14CM0 1322 aa28.16■■■□□ 2.1
CDKN3-202ENST00000335183 STAM2O75886 525 aa28.15■■■□□ 2.1
CDKN3-202ENST00000335183 CTSHP09668 335 aa28.15■■■□□ 2.1
CDKN3-202ENST00000335183 ICAM3P32942 547 aa28.15■■■□□ 2.1
CDKN3-202ENST00000335183 INPP4AQ96PE3 977 aaPredicted RBP28.15■■■□□ 2.1
CDKN3-202ENST00000335183 USP26Q9BXU7 913 aa28.15■■■□□ 2.1
CDKN3-202ENST00000335183 INSL6Q9Y581 213 aa28.15■■■□□ 2.1
CDKN3-202ENST00000335183 SUPT16HQ9Y5B9 1047 aaKnown RBP28.15■■■□□ 2.1
CDKN3-202ENST00000335183 SGSM2O43147 1006 aa28.14■■■□□ 2.1
CDKN3-202ENST00000335183 FIBPO43427 364 aa28.14■■■□□ 2.1
CDKN3-202ENST00000335183 SEMA3FQ13275 785 aa28.14■■■□□ 2.1
CDKN3-202ENST00000335183 METTL7BQ6UX53 244 aa28.14■■■□□ 2.1
CDKN3-202ENST00000335183 CTCFLQ8NI51 663 aaPredicted RBP28.14■■■□□ 2.1
CDKN3-202ENST00000335183 IGDCC4Q8TDY8 1250 aa28.14■■■□□ 2.1
CDKN3-202ENST00000335183 CUL5Q93034 780 aa28.14■■■□□ 2.1
CDKN3-202ENST00000335183 MYL10Q9BUA6 226 aa28.14■■■□□ 2.1
CDKN3-202ENST00000335183 NLRC5Q86WI3 1866 aa28.14■■■□□ 2.1
CDKN3-202ENST00000335183 SPATA31C2B4DYI2 1134 aa28.13■■■□□ 2.09
CDKN3-202ENST00000335183 HOXC8P31273 242 aa28.13■■■□□ 2.09
CDKN3-202ENST00000335183 SP4Q02446 784 aa28.13■■■□□ 2.09
CDKN3-202ENST00000335183 PLEKHG4Q58EX7 1191 aa28.13■■■□□ 2.09
CDKN3-202ENST00000335183 UTP14CQ5TAP6 766 aaKnown RBP28.13■■■□□ 2.09
CDKN3-202ENST00000335183 TRIM50Q86XT4 487 aa28.13■■■□□ 2.09
CDKN3-202ENST00000335183 MB21D2Q8IYB1 491 aaPredicted RBP28.13■■■□□ 2.09
CDKN3-202ENST00000335183 RRP36Q96EU6 259 aaKnown RBP28.13■■■□□ 2.09
CDKN3-202ENST00000335183 GPR20Q99678 358 aa28.13■■■□□ 2.09
CDKN3-202ENST00000335183 SETD4Q9NVD3 440 aa28.13■■■□□ 2.09
CDKN3-202ENST00000335183 BDP1A6H8Y1 2624 aa28.13■■■□□ 2.09
CDKN3-202ENST00000335183 XIRP2A4UGR9 3374 aa28.12■■■□□ 2.09
CDKN3-202ENST00000335183 BRWD1Q9NSI6 2320 aa28.12■■■□□ 2.09
CDKN3-202ENST00000335183 USP17L6PQ6QN14 398 aa28.12■■■□□ 2.09
CDKN3-202ENST00000335183 ZNF654Q8IZM8 581 aa28.12■■■□□ 2.09
CDKN3-202ENST00000335183 SEPT8Q92599 483 aa28.12■■■□□ 2.09
CDKN3-202ENST00000335183 C17orf80Q9BSJ5 609 aa28.12■■■□□ 2.09
CDKN3-202ENST00000335183 ZNF215Q9UL58 517 aaPredicted RBP28.12■■■□□ 2.09
CDKN3-202ENST00000335183 GNAT1P11488 350 aa28.11■■■□□ 2.09
CDKN3-202ENST00000335183 KIF5BP33176 963 aa28.11■■■□□ 2.09
CDKN3-202ENST00000335183 MKRN4PQ13434 485 aaPredicted RBP28.11■■■□□ 2.09
CDKN3-202ENST00000335183 FBXO22Q8NEZ5 403 aa28.11■■■□□ 2.09
CDKN3-202ENST00000335183 MAP4K1Q92918 833 aa28.11■■■□□ 2.09
CDKN3-202ENST00000335183 SPZ1Q9BXG8 430 aa28.11■■■□□ 2.09
CDKN3-202ENST00000335183 LY9Q9HBG7 655 aa28.11■■■□□ 2.09
CDKN3-202ENST00000335183 SEC63Q9UGP8 760 aaKnown RBP28.11■■■□□ 2.09
CDKN3-202ENST00000335183 TELO2Q9Y4R8 837 aa28.11■■■□□ 2.09
CDKN3-202ENST00000335183 RBM8AQ9Y5S9 174 aaKnown RBP28.11■■■□□ 2.09
CDKN3-202ENST00000335183 DDAH1O94760 285 aa28.1■■■□□ 2.09
CDKN3-202ENST00000335183 PCNX4Q63HM2 1172 aa28.1■■■□□ 2.09
CDKN3-202ENST00000335183 CASC1Q6TDU7 716 aa28.1■■■□□ 2.09
CDKN3-202ENST00000335183 C1QTNF1Q9BXJ1 281 aa28.1■■■□□ 2.09
CDKN3-202ENST00000335183 CAND2O75155 1236 aa28.09■■■□□ 2.09
CDKN3-202ENST00000335183 UPP2O95045 317 aa28.09■■■□□ 2.09
CDKN3-202ENST00000335183 HTRA4P83105 476 aaPredicted RBP28.09■■■□□ 2.09
CDKN3-202ENST00000335183 ARHGAP4P98171 946 aa28.09■■■□□ 2.09
CDKN3-202ENST00000335183 NFXL1Q6ZNB6 911 aa28.09■■■□□ 2.09
CDKN3-202ENST00000335183 NLRX1Q86UT6 975 aa28.09■■■□□ 2.09
CDKN3-202ENST00000335183 MAP3K14Q99558 947 aa28.09■■■□□ 2.09
CDKN3-202ENST00000335183 OSBPL7Q9BZF2 842 aa28.09■■■□□ 2.09
CDKN3-202ENST00000335183 IRX6P78412 446 aaPredicted RBP28.08■■■□□ 2.09
CDKN3-202ENST00000335183 YME1L1Q96TA2 773 aa28.08■■■□□ 2.09
CDKN3-202ENST00000335183 MEIS2O14770 477 aa28.07■■■□□ 2.08
CDKN3-202ENST00000335183 PRC1O43663 620 aa28.07■■■□□ 2.08
CDKN3-202ENST00000335183 PLEKHA8P1O95397 391 aa28.07■■■□□ 2.08
CDKN3-202ENST00000335183 XRRA1Q6P2D8 792 aa28.07■■■□□ 2.08
CDKN3-202ENST00000335183 SP7Q8TDD2 431 aaPredicted RBP28.07■■■□□ 2.08
CDKN3-202ENST00000335183 SENP7Q9BQF6 1050 aa28.07■■■□□ 2.08
CDKN3-202ENST00000335183 UBE2ZQ9H832 354 aaPredicted RBP28.07■■■□□ 2.08
CDKN3-202ENST00000335183 RALGAPA2Q2PPJ7 1873 aa28.06■■■□□ 2.08
CDKN3-202ENST00000335183 CCDC69A6NI79 296 aa28.06■■■□□ 2.08
CDKN3-202ENST00000335183 PIK3CDO00329 1044 aa28.06■■■□□ 2.08
CDKN3-202ENST00000335183 CMTR1Q8N1G2 835 aaKnown RBP28.06■■■□□ 2.08
CDKN3-202ENST00000335183 LMBR1Q8WVP7 490 aa28.06■■■□□ 2.08
CDKN3-202ENST00000335183 TOP1MTQ969P6 601 aa28.06■■■□□ 2.08
CDKN3-202ENST00000335183 LZTS2Q9BRK4 669 aa28.06■■■□□ 2.08
CDKN3-202ENST00000335183 EPHX3Q9H6B9 360 aa28.06■■■□□ 2.08
CDKN3-202ENST00000335183 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.05■■■□□ 2.08
CDKN3-202ENST00000335183 RXRAP19793 462 aa28.05■■■□□ 2.08
CDKN3-202ENST00000335183 SMARCA1P28370 1054 aa28.05■■■□□ 2.08
CDKN3-202ENST00000335183 GNAQP50148 359 aa28.05■■■□□ 2.08
CDKN3-202ENST00000335183 SRBD1Q8N5C6 995 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms