RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 L2HGDHQ9H9P8 463 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 SORBS3O60504 671 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 SLU7O95391 586 aaKnown RBP17.71■□□□□ 0.43
SHISA2-201ENST00000319420 SPIRE1Q08AE8 756 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 ELF2Q15723 593 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 NSMFQ6X4W1 530 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 ABHD10Q9NUJ1 306 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 PGAP2Q9UHJ9 254 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 DNM3Q9UQ16 869 aa17.71■□□□□ 0.43
SHISA2-201ENST00000319420 LGALS16A8MUM7 142 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 ZSCAN12O43309 604 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 SPATA31C1P0DKV0 1188 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 CYP11B2P19099 503 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 CASP5P51878 434 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 HAUS3Q68CZ6 603 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 MTERF4Q7Z6M4 381 aaKnown RBP17.7■□□□□ 0.42
SHISA2-201ENST00000319420 CRYGNQ8WXF5 182 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 ZBED3Q96IU2 234 aaPredicted RBP17.7■□□□□ 0.42
SHISA2-201ENST00000319420 PANX2Q96RD6 677 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 IKZF4Q9H2S9 585 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 THAP9Q9H5L6 903 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 COL20A1Q9P218 1284 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 ZNF646O15015 1829 aaPredicted RBP17.7■□□□□ 0.42
SHISA2-201ENST00000319420 EIF2AK2P19525 551 aaKnown RBP17.7■□□□□ 0.42
SHISA2-201ENST00000319420 ERVK-24P63145 666 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 ARSHQ5FYA8 562 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 CNGA4Q8IV77 575 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 MTMR14Q8NCE2 650 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
SHISA2-201ENST00000319420 EIF2AK1Q9BQI3 630 aaKnown RBP17.7■□□□□ 0.42
SHISA2-201ENST00000319420 RANBP17Q9H2T7 1088 aaKnown RBP17.7■□□□□ 0.42
SHISA2-201ENST00000319420 MRPL11Q9Y3B7 192 aaKnown RBP17.7■□□□□ 0.42
SHISA2-201ENST00000319420 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.7■□□□□ 0.42
SHISA2-201ENST00000319420 PEX10O60683 326 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 GAS7O60861 476 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 MUM1L1Q5H9M0 696 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 FKBP1CQ5VVH2 108 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 MYOCDQ8IZQ8 938 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 ERMNQ8TAM6 284 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 CRACR2AQ9BSW2 395 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 MMRN2Q9H8L6 949 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 SAMM50Q9Y512 469 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 KDM3AQ9Y4C1 1321 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
SHISA2-201ENST00000319420 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 CYP3A7-CYP3A51PA0A087WV96 503 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 MYCLP12524 364 aaPredicted RBP17.69■□□□□ 0.42
SHISA2-201ENST00000319420 CYP3A7P24462 503 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 EEF1GP26641 437 aaKnown RBP17.69■□□□□ 0.42
SHISA2-201ENST00000319420 EPS15P42566 896 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 SMCR8Q8TEV9 937 aaPredicted RBP17.69■□□□□ 0.42
SHISA2-201ENST00000319420 DYDC2Q96IM9 177 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 RPAP3Q9H6T3 665 aaPredicted RBP17.69■□□□□ 0.42
SHISA2-201ENST00000319420 GGA3Q9NZ52 723 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 FEM1BQ9UK73 627 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 LUC7L2Q9Y383 392 aaKnown RBP17.69■□□□□ 0.42
SHISA2-201ENST00000319420 ZHX2Q9Y6X8 837 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 SPDYE4A6NLX3 237 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 CCP110O43303 1012 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 TBC1D12O60347 775 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 VCAM1P19320 739 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 HMGCS2P54868 508 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 PLS1Q14651 629 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 ERCC6LQ2NKX8 1250 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 CCDC65Q8IXS2 484 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 NAP1L4Q99733 375 aaKnown RBP17.69■□□□□ 0.42
SHISA2-201ENST00000319420 REEP2Q9BRK0 252 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 ZNF577Q9BSK1 485 aa17.69■□□□□ 0.42
SHISA2-201ENST00000319420 PVALEFA0A1B0GWK0 134 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
SHISA2-201ENST00000319420 KSR1Q8IVT5 923 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 BANK1Q8NDB2 785 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 ERO1AQ96HE7 468 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 RUSC1Q9BVN2 902 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 ZSWIM4Q9H7M6 989 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 PRDM10Q9NQV6 1147 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 IGLV3-22A0A075B6J6 115 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 CCDC175P0C221 793 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 APBA1Q02410 837 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 Q4G0T1 1027 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 CCDC40Q4G0X9 1142 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 CEP55Q53EZ4 464 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 CENPPQ6IPU0 288 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 SFR1Q86XK3 245 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 PRPF38AQ8NAV1 312 aaKnown RBP17.68■□□□□ 0.42
SHISA2-201ENST00000319420 WDR11Q9BZH6 1224 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 ADGRG1Q9Y653 693 aa17.68■□□□□ 0.42
SHISA2-201ENST00000319420 FAM170AA1A519 330 aa17.67■□□□□ 0.42
SHISA2-201ENST00000319420 PRPF6O94906 941 aaKnown RBP17.67■□□□□ 0.42
SHISA2-201ENST00000319420 SP4Q02446 784 aa17.67■□□□□ 0.42
SHISA2-201ENST00000319420 KCNA1Q09470 495 aa17.67■□□□□ 0.42
SHISA2-201ENST00000319420 CCDC94Q9BW85 323 aaPredicted RBP17.67■□□□□ 0.42
SHISA2-201ENST00000319420 VAV3Q9UKW4 847 aa17.67■□□□□ 0.42
SHISA2-201ENST00000319420 PHLPP2Q6ZVD8 1323 aa17.67■□□□□ 0.42
SHISA2-201ENST00000319420 SLC12A3P55017 1021 aa17.67■□□□□ 0.42
SHISA2-201ENST00000319420 TSR1Q2NL82 804 aaKnown RBP17.67■□□□□ 0.42
SHISA2-201ENST00000319420 FAM160B2Q86V87 743 aa17.67■□□□□ 0.42
SHISA2-201ENST00000319420 ATG4CQ96DT6 458 aa17.67■□□□□ 0.42
SHISA2-201ENST00000319420 TRIM10Q9UDY6 481 aa17.67■□□□□ 0.42
SHISA2-201ENST00000319420 EPHB6O15197 1021 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms