RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 LGALS16A8MUM7 142 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 TECP42680 631 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 ZNF157P51786 506 aaPredicted RBP15.8■□□□□ 0.12
VRK3-201ENST00000316763 DGKZQ13574 1117 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 TSR1Q2NL82 804 aaKnown RBP15.8■□□□□ 0.12
VRK3-201ENST00000316763 PRPF38AQ8NAV1 312 aaKnown RBP15.8■□□□□ 0.12
VRK3-201ENST00000316763 LRRN4CLQ8ND94 238 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 SLF1Q9BQI6 1058 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 RAB34Q9BZG1 259 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 MRFAP1Q9Y605 127 aa15.8■□□□□ 0.12
VRK3-201ENST00000316763 MEIS2O14770 477 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 FANCGO15287 622 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 ASIC1P78348 528 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 PPP2R3AQ06190 1150 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 PDE4DQ08499 809 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 CALCRLQ16602 461 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 MB21D1Q8N884 522 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 TRIM9Q9C026 710 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 LZTFL1Q9NQ48 299 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 CREBZFQ9NS37 354 aa15.79■□□□□ 0.12
VRK3-201ENST00000316763 TRIM49BA6NDI0 452 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 CXCL11O14625 94 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 OPLAHO14841 1288 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 CCNE1P24864 410 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 KRT9P35527 623 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 DNM2P50570 870 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 MKRN3Q13064 507 aaKnown RBP15.78■□□□□ 0.12
VRK3-201ENST00000316763 BMS1Q14692 1282 aaKnown RBP15.78■□□□□ 0.12
VRK3-201ENST00000316763 UBE2SQ16763 222 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 USH1GQ495M9 461 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 SPRYD7Q5W111 196 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 CNNM4Q6P4Q7 775 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 RASAL3Q86YV0 1011 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 IRF2BP1Q8IU81 584 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 KRT222Q8N1A0 295 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 RPAP3Q9H6T3 665 aaPredicted RBP15.78■□□□□ 0.12
VRK3-201ENST00000316763 STK17AQ9UEE5 414 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 KCNH4Q9UQ05 1017 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 PES1O00541 588 aaKnown RBP15.78■□□□□ 0.12
VRK3-201ENST00000316763 EDIL3O43854 480 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 HOXA7P31268 230 aaPredicted RBP15.78■□□□□ 0.12
VRK3-201ENST00000316763 HMGCS2P54868 508 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 SH3D19Q5HYK7 790 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 TTI2Q6NXR4 508 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 SV2BQ7L1I2 683 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 CSGALNACT2Q8N6G5 542 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 P2RX5Q93086 422 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 CDK5RAP3Q96JB5 506 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 HHIPL1Q96JK4 782 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 PPP1R9AQ9ULJ8 1098 aa15.78■□□□□ 0.12
VRK3-201ENST00000316763 USP17L15C9J2P7 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 USP17L13C9JLJ4 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 USP17L11C9JVI0 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 USP17L18D6R9N7 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 USP17L22D6RA61 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 USP17L17D6RBQ6 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 USP17L19D6RCP7 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 USP17L20D6RJB6 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 PIK3CDO00329 1044 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 TXKP42681 527 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 FXR2P51116 673 aaKnown RBP eCLIP15.77■□□□□ 0.12
VRK3-201ENST00000316763 USP17L24Q0WX57 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 COBLL1Q53SF7 1204 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 MCTP2Q6DN12 878 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 USP17L6PQ6QN14 398 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 POTEDQ86YR6 584 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 OR8K1Q8NGG5 319 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 MTMR9Q96QG7 549 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 TANGO6Q9C0B7 1094 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 LRRC27Q9C0I9 530 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 MYO1AQ9UBC5 1043 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 LRWD1Q9UFC0 647 aa15.77■□□□□ 0.12
VRK3-201ENST00000316763 LUC7L2Q9Y383 392 aaKnown RBP15.77■□□□□ 0.12
VRK3-201ENST00000316763 ZNF536O15090 1300 aa15.77■□□□□ 0.11
VRK3-201ENST00000316763 ICAM1P05362 532 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 ZBTB48P10074 688 aaPredicted RBP15.76■□□□□ 0.11
VRK3-201ENST00000316763 PMS1P54277 932 aaKnown RBP15.76■□□□□ 0.11
VRK3-201ENST00000316763 AP3B2Q13367 1082 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 PDIA5Q14554 519 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 GPR161Q8N6U8 529 aaKnown RBP15.76■□□□□ 0.11
VRK3-201ENST00000316763 NUP58Q9BVL2 599 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 SLC38A10Q9HBR0 1119 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 A0A0G2JLL6 359 aaPredicted RBP15.76■□□□□ 0.11
VRK3-201ENST00000316763 FLOT1O75955 427 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 SLC10A3P09131 477 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 PRKCSHP14314 528 aaPredicted RBP15.76■□□□□ 0.11
VRK3-201ENST00000316763 TAL1P17542 331 aaPredicted RBP15.76■□□□□ 0.11
VRK3-201ENST00000316763 CLCN6P51797 869 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 ERVK-24P63145 666 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 ZNF569Q5MCW4 686 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 CCDC174Q6PII3 467 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 TMCO3Q6UWJ1 677 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 PRRT2Q7Z6L0 340 aaPredicted RBP15.76■□□□□ 0.11
VRK3-201ENST00000316763 ZNF507Q8TCN5 953 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 LRRC15Q8TF66 581 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 GOLGA1Q92805 767 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 MS4A4AQ96JQ5 239 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 MMTAG2Q9BU76 263 aaKnown RBP15.76■□□□□ 0.11
VRK3-201ENST00000316763 CAPN11Q9UMQ6 739 aa15.76■□□□□ 0.11
VRK3-201ENST00000316763 PVALEFA0A1B0GWK0 134 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms