RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 PCDHA6Q9UN73 950 aa20.8■□□□□ 0.92
HERPUD2-201ENST00000311350 PCDHA8Q9Y5H6 950 aa20.8■□□□□ 0.92
HERPUD2-201ENST00000311350 NFKBIEO00221 500 aa20.8■□□□□ 0.92
HERPUD2-201ENST00000311350 ADAMTS3O15072 1205 aa20.8■□□□□ 0.92
HERPUD2-201ENST00000311350 VEGFAP15692 232 aaPredicted RBP20.8■□□□□ 0.92
HERPUD2-201ENST00000311350 ORC2Q13416 577 aaPredicted RBP20.8■□□□□ 0.92
HERPUD2-201ENST00000311350 ZSCAN29Q8IWY8 852 aaPredicted RBP20.8■□□□□ 0.92
HERPUD2-201ENST00000311350 C7orf25Q9BPX7 421 aa20.8■□□□□ 0.92
HERPUD2-201ENST00000311350 TUBGCP2Q9BSJ2 902 aa20.8■□□□□ 0.92
HERPUD2-201ENST00000311350 MYH10P35580 1976 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 LMNB1P20700 586 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 DNA2P51530 1060 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 SATB1Q01826 763 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 P2RX5Q93086 422 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 EPB41L5Q9HCM4 733 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 A6NNZ2 444 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 OPLAHO14841 1288 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 ATP2C2O75185 946 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 TACC1O75410 805 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 NEBLO76041 1014 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 ITIH3Q06033 890 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 TUBB8Q3ZCM7 444 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 SOGA3Q5TF21 947 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 TYW1BQ6NUM6 668 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 PARP9Q8IXQ6 854 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 TRIM58Q8NG06 486 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 OSBPL7Q9BZF2 842 aa20.79■□□□□ 0.92
HERPUD2-201ENST00000311350 GCFC2P16383 781 aaKnown RBP20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 HNRNPH3P31942 346 aaKnown RBP20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 GUCY2DQ02846 1103 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 QPCTQ16769 361 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 CYB5D1Q6P9G0 228 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 PNMA1Q8ND90 353 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 CYFIP2Q96F07 1278 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 CCDC42Q96M95 316 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 ANKRD2Q9GZV1 360 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 TMEM60Q9H2L4 133 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 SH2D4AQ9H788 454 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 BARHL2Q9NY43 387 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 TPX2Q9ULW0 747 aaKnown RBP20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 TNRC6CQ9HCJ0 1690 aaKnown RBP20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 FAM107AO95990 144 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 ALDH1B1P30837 517 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 CDR1P51861 262 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 TBC1D8BQ0IIM8 1120 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 SPTY2D1Q68D10 685 aaPredicted RBP20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 FUKQ8N0W3 1084 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 CSGALNACT2Q8N6G5 542 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 IFIH1Q9BYX4 1025 aaKnown RBP20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 PCDHA13Q9Y5I0 950 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 FLT1P17948 1338 aa20.78■□□□□ 0.92
HERPUD2-201ENST00000311350 SNCBQ16143 134 aa20.77■□□□□ 0.92
HERPUD2-201ENST00000311350 RASSF8Q8NHQ8 419 aa20.77■□□□□ 0.92
HERPUD2-201ENST00000311350 PLIN2Q99541 437 aa20.77■□□□□ 0.92
HERPUD2-201ENST00000311350 TACO1Q9BSH4 297 aaKnown RBP20.77■□□□□ 0.92
HERPUD2-201ENST00000311350 MAD2L2Q9UI95 211 aa20.77■□□□□ 0.92
HERPUD2-201ENST00000311350 STXBP3O00186 592 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 CYP2D6P10635 497 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 HIBADHP31937 336 aaKnown RBP20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 PRELPP51888 382 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 ITGB3BPQ13352 177 aaPredicted RBP20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 SPA17Q15506 151 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 C12orf60Q5U649 245 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 CCDC121Q6ZUS5 278 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 C7orf43Q8WVR3 580 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 RPGRQ92834 1020 aaKnown RBP20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 ATP6V1G3Q96LB4 118 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 HYOU1Q9Y4L1 999 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 ABCB11O95342 1321 aa20.77■□□□□ 0.91
HERPUD2-201ENST00000311350 SLX4Q8IY92 1834 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 HEXIM1O94992 359 aaKnown RBP20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 PRLRP16471 622 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 AMPD3Q01432 767 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 IL17RBQ9NRM6 502 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 ARHGAP20Q9P2F6 1191 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 BUB1O43683 1085 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 RPSAP08865 295 aaKnown RBP20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 TFAP4Q01664 338 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 C3orf67Q6ZVT6 689 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 KRT25Q7Z3Z0 450 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 CABP7Q86V35 215 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 GPKOWQ92917 476 aaPredicted RBP eCLIP20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 CNOT6LQ96LI5 555 aaKnown RBP20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 TRIM9Q9C026 710 aa20.76■□□□□ 0.91
HERPUD2-201ENST00000311350 SKAP2O75563 359 aaPredicted RBP20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 RNASE9P60153 205 aaKnown RBP20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 EVX2Q03828 476 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 PLCB4Q15147 1175 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 OR2W6PQ8NHA6 318 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 CASKIN2Q8WXE0 1202 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 NLRP3Q96P20 1036 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 TLR10Q9BXR5 811 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 TAOK3Q9H2K8 898 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 GDF3Q9NR23 364 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 EPHB6O15197 1021 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 PPP1R12BO60237 982 aaPredicted RBP20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 OR52Z1P0C646 297 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 TMOD1P28289 359 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 TNFRSF8P28908 595 aa20.75■□□□□ 0.91
HERPUD2-201ENST00000311350 LRCH2Q5VUJ6 765 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms