RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 H3BRB1 525 aa22.42■■□□□ 1.18
LIME1-201ENST00000309546 FGD1P98174 961 aa22.42■■□□□ 1.18
LIME1-201ENST00000309546 RBL2Q08999 1139 aa22.42■■□□□ 1.18
LIME1-201ENST00000309546 HIC1Q14526 733 aa22.42■■□□□ 1.18
LIME1-201ENST00000309546 TSGA10IPQ3SY00 556 aa22.42■■□□□ 1.18
LIME1-201ENST00000309546 UTP14CQ5TAP6 766 aaKnown RBP22.42■■□□□ 1.18
LIME1-201ENST00000309546 WNT8BQ93098 351 aa22.42■■□□□ 1.18
LIME1-201ENST00000309546 GPR20Q99678 358 aa22.42■■□□□ 1.18
LIME1-201ENST00000309546 TUT1Q9H6E5 874 aaKnown RBP22.42■■□□□ 1.18
LIME1-201ENST00000309546 C17orf102A2RUQ5 167 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 SMIM10L2AP0DMW4 78 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 SMIM10L2BP0DMW5 78 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 KCNJ6P48051 423 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 NAPAP54920 295 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 WWC2Q6AWC2 1192 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 TRIM50Q86XT4 487 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 PPM1EQ8WY54 764 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 USP26Q9BXU7 913 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 PKD2L1Q9P0L9 805 aa22.41■■□□□ 1.18
LIME1-201ENST00000309546 NBNO60934 754 aa22.4■■□□□ 1.18
LIME1-201ENST00000309546 BAIAP3O94812 1187 aa22.4■■□□□ 1.18
LIME1-201ENST00000309546 CPA1P15085 419 aa22.4■■□□□ 1.18
LIME1-201ENST00000309546 TRIM71Q2Q1W2 868 aaKnown RBP22.4■■□□□ 1.18
LIME1-201ENST00000309546 ZNF618Q5T7W0 954 aa22.4■■□□□ 1.18
LIME1-201ENST00000309546 USP38Q8NB14 1042 aa22.4■■□□□ 1.18
LIME1-201ENST00000309546 PCDHA6Q9UN73 950 aa22.4■■□□□ 1.18
LIME1-201ENST00000309546 TELO2Q9Y4R8 837 aa22.4■■□□□ 1.18
LIME1-201ENST00000309546 PCDHA8Q9Y5H6 950 aa22.4■■□□□ 1.18
LIME1-201ENST00000309546 UNC80Q8N2C7 3258 aa22.39■■□□□ 1.18
LIME1-201ENST00000309546 RBAK-RBAKDNI3L0D1 243 aa22.39■■□□□ 1.17
LIME1-201ENST00000309546 PARNO95453 639 aaKnown RBP22.39■■□□□ 1.17
LIME1-201ENST00000309546 CA3P07451 260 aa22.39■■□□□ 1.17
LIME1-201ENST00000309546 HMGB1P09429 215 aaKnown RBP22.39■■□□□ 1.17
LIME1-201ENST00000309546 IGFBP4P22692 258 aa22.39■■□□□ 1.17
LIME1-201ENST00000309546 GPNMBQ14956 572 aa22.39■■□□□ 1.17
LIME1-201ENST00000309546 CNKSR3Q6P9H4 555 aa22.39■■□□□ 1.17
LIME1-201ENST00000309546 ATP6V0A1Q93050 837 aa22.39■■□□□ 1.17
LIME1-201ENST00000309546 GPRASP2Q96D09 838 aa22.39■■□□□ 1.17
LIME1-201ENST00000309546 JAKMIP1Q96N16 626 aaKnown RBP22.39■■□□□ 1.17
LIME1-201ENST00000309546 SENP7Q9BQF6 1050 aa22.39■■□□□ 1.17
LIME1-201ENST00000309546 EHMT1Q9H9B1 1298 aa22.39■■□□□ 1.17
LIME1-201ENST00000309546 ZNF215Q9UL58 517 aaPredicted RBP22.39■■□□□ 1.17
LIME1-201ENST00000309546 KAT6AQ92794 2004 aa22.38■■□□□ 1.17
LIME1-201ENST00000309546 ITGB5P18084 799 aa22.38■■□□□ 1.17
LIME1-201ENST00000309546 THPOP40225 353 aa22.38■■□□□ 1.17
LIME1-201ENST00000309546 ADGRE1Q14246 886 aa22.38■■□□□ 1.17
LIME1-201ENST00000309546 TYW1BQ6NUM6 668 aa22.38■■□□□ 1.17
LIME1-201ENST00000309546 SERINC5Q86VE9 423 aa22.38■■□□□ 1.17
LIME1-201ENST00000309546 HERC6Q8IVU3 1022 aa22.38■■□□□ 1.17
LIME1-201ENST00000309546 GIMAP8Q8ND71 665 aaPredicted RBP22.38■■□□□ 1.17
LIME1-201ENST00000309546 PHOSPHO2Q8TCD6 241 aa22.38■■□□□ 1.17
LIME1-201ENST00000309546 CDHR1Q96JP9 859 aa22.38■■□□□ 1.17
LIME1-201ENST00000309546 V9GY48 417 aaPredicted RBP22.38■■□□□ 1.17
LIME1-201ENST00000309546 KIF28PB7ZC32 967 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 TREHO43280 583 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 ATP9AO75110 1047 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 CXCL10P02778 98 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 CDC27P30260 824 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 HSPA4P34932 840 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 WDR5P61964 334 aaKnown RBP22.37■■□□□ 1.17
LIME1-201ENST00000309546 FUT2Q10981 343 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 MTMR1Q13613 665 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 TRAF7Q6Q0C0 670 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 PGBD1Q96JS3 809 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 RNPEPQ9H4A4 650 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 UBIAD1Q9Y5Z9 338 aa22.37■■□□□ 1.17
LIME1-201ENST00000309546 KCNA2P16389 499 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 TCF7P36402 384 aaPredicted RBP22.36■■□□□ 1.17
LIME1-201ENST00000309546 METAP2P50579 478 aaKnown RBP eCLIP22.36■■□□□ 1.17
LIME1-201ENST00000309546 ADCY7P51828 1080 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 APOBRQ0VD83 1088 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 TCTN1Q2MV58 587 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 PPP1R18Q6NYC8 613 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 BLOC1S2Q6QNY1 142 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 Q6ZUG5 572 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 TMCO2Q7Z6W1 182 aaPredicted RBP22.36■■□□□ 1.17
LIME1-201ENST00000309546 CERS4Q9HA82 394 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 RIC8AQ9NPQ8 531 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 SETD4Q9NVD3 440 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 SNX14Q9Y5W7 946 aa22.36■■□□□ 1.17
LIME1-201ENST00000309546 RSPH10B2B2RC85 870 aa22.35■■□□□ 1.17
LIME1-201ENST00000309546 STXBP3O00186 592 aa22.35■■□□□ 1.17
LIME1-201ENST00000309546 NEFLP07196 543 aa22.35■■□□□ 1.17
LIME1-201ENST00000309546 RSPH10BP0C881 870 aa22.35■■□□□ 1.17
LIME1-201ENST00000309546 DEFB103AP81534 67 aa22.35■■□□□ 1.17
LIME1-201ENST00000309546 MBTPS1Q14703 1052 aa22.35■■□□□ 1.17
LIME1-201ENST00000309546 CCDC85BQ15834 202 aaPredicted RBP22.35■■□□□ 1.17
LIME1-201ENST00000309546 BRF1Q92994 677 aa22.35■■□□□ 1.17
LIME1-201ENST00000309546 COL25A1Q9BXS0 654 aaPredicted RBP22.35■■□□□ 1.17
LIME1-201ENST00000309546 FAM217BQ9NTX9 383 aaPredicted RBP22.35■■□□□ 1.17
LIME1-201ENST00000309546 PRUNE2Q8WUY3 3088 aa22.34■■□□□ 1.17
LIME1-201ENST00000309546 CHD9Q3L8U1 2897 aa22.34■■□□□ 1.17
LIME1-201ENST00000309546 hCG_1984214I3L0E3 225 aa22.34■■□□□ 1.17
LIME1-201ENST00000309546 TLL1O43897 1013 aa22.34■■□□□ 1.17
LIME1-201ENST00000309546 REC8O95072 547 aa22.34■■□□□ 1.17
LIME1-201ENST00000309546 CTSHP09668 335 aa22.34■■□□□ 1.17
LIME1-201ENST00000309546 GNAT1P11488 350 aa22.34■■□□□ 1.17
LIME1-201ENST00000309546 HOXC8P31273 242 aa22.34■■□□□ 1.17
LIME1-201ENST00000309546 RCAN1P53805 252 aa22.34■■□□□ 1.17
LIME1-201ENST00000309546 ARHGAP4P98171 946 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms