RNA–Protein interactions for RNA: ENST00000297157.7

RP9-201, Transcript of RP9, pre-mRNA splicing factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RP9, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-201ENST00000297157 HDAC6Q9UBN7 1215 aa29.41■■■□□ 2.3
RP9-201ENST00000297157 MTCH2Q9Y6C9 303 aa29.41■■■□□ 2.3
RP9-201ENST00000297157 PIK3CDO00329 1044 aa29.4■■■□□ 2.3
RP9-201ENST00000297157 PARNO95453 639 aaKnown RBP29.4■■■□□ 2.3
RP9-201ENST00000297157 CXCL10P02778 98 aa29.4■■■□□ 2.3
RP9-201ENST00000297157 PSEN2P49810 448 aa29.4■■■□□ 2.3
RP9-201ENST00000297157 APOBRQ0VD83 1088 aa29.4■■■□□ 2.3
RP9-201ENST00000297157 TSPYL2Q9H2G4 693 aaPredicted RBP29.4■■■□□ 2.3
RP9-201ENST00000297157 SEC63Q9UGP8 760 aaKnown RBP29.4■■■□□ 2.3
RP9-201ENST00000297157 GCOM1H8Y6P7 765 aaPredicted RBP29.39■■■□□ 2.3
RP9-201ENST00000297157 RFXAPO00287 272 aa29.39■■■□□ 2.3
RP9-201ENST00000297157 POLR2MP0CAP2 368 aa29.39■■■□□ 2.3
RP9-201ENST00000297157 WDR5P61964 334 aaKnown RBP29.39■■■□□ 2.3
RP9-201ENST00000297157 MICALL1Q8N3F8 863 aa29.39■■■□□ 2.3
RP9-201ENST00000297157 MYH7BA7E2Y1 1941 aa29.39■■■□□ 2.3
RP9-201ENST00000297157 GOLGA8AA7E2F4 631 aa29.38■■■□□ 2.29
RP9-201ENST00000297157 GOLGA8BA8MQT2 603 aa29.38■■■□□ 2.29
RP9-201ENST00000297157 KIF28PB7ZC32 967 aa29.38■■■□□ 2.29
RP9-201ENST00000297157 MEIS2O14770 477 aa29.38■■■□□ 2.29
RP9-201ENST00000297157 CKBP12277 381 aa29.38■■■□□ 2.29
RP9-201ENST00000297157 HOXA13P31271 388 aaPredicted RBP29.38■■■□□ 2.29
RP9-201ENST00000297157 ANAPC15P60006 121 aa29.38■■■□□ 2.29
RP9-201ENST00000297157 TOB2Q14106 344 aaPredicted RBP29.38■■■□□ 2.29
RP9-201ENST00000297157 MFSD10Q14728 455 aa29.38■■■□□ 2.29
RP9-201ENST00000297157 PIBF1Q8WXW3 757 aa29.38■■■□□ 2.29
RP9-201ENST00000297157 UHRF1Q96T88 793 aaPredicted RBP29.38■■■□□ 2.29
RP9-201ENST00000297157 CERS4Q9HA82 394 aa29.38■■■□□ 2.29
RP9-201ENST00000297157 COL4A4P53420 1690 aaPredicted RBP29.37■■■□□ 2.29
RP9-201ENST00000297157 NBNO60934 754 aa29.37■■■□□ 2.29
RP9-201ENST00000297157 ZNF286BP0CG31 522 aa29.37■■■□□ 2.29
RP9-201ENST00000297157 KCNJ6P48051 423 aa29.37■■■□□ 2.29
RP9-201ENST00000297157 TRIM71Q2Q1W2 868 aaKnown RBP29.37■■■□□ 2.29
RP9-201ENST00000297157 CNKSR3Q6P9H4 555 aa29.37■■■□□ 2.29
RP9-201ENST00000297157 KCNV1Q6PIU1 500 aa29.37■■■□□ 2.29
RP9-201ENST00000297157 TRAF7Q6Q0C0 670 aa29.37■■■□□ 2.29
RP9-201ENST00000297157 VSIG10LQ86VR7 867 aa29.37■■■□□ 2.29
RP9-201ENST00000297157 C7orf31Q8N865 590 aa29.37■■■□□ 2.29
RP9-201ENST00000297157 GTPBP6O43824 516 aaPredicted RBP29.36■■■□□ 2.29
RP9-201ENST00000297157 PTK7Q13308 1070 aa29.36■■■□□ 2.29
RP9-201ENST00000297157 PGM5Q15124 567 aa29.36■■■□□ 2.29
RP9-201ENST00000297157 KIAA0753Q2KHM9 967 aa29.36■■■□□ 2.29
RP9-201ENST00000297157 MYSM1Q5VVJ2 828 aa29.36■■■□□ 2.29
RP9-201ENST00000297157 TEX2Q8IWB9 1127 aa29.36■■■□□ 2.29
RP9-201ENST00000297157 DHX37Q8IY37 1157 aaKnown RBP29.36■■■□□ 2.29
RP9-201ENST00000297157 CCDC82Q8N4S0 544 aa29.36■■■□□ 2.29
RP9-201ENST00000297157 IL31RAQ8NI17 732 aa29.36■■■□□ 2.29
RP9-201ENST00000297157 ALG1Q9BT22 464 aa29.36■■■□□ 2.29
RP9-201ENST00000297157 CYP46A1Q9Y6A2 500 aa29.36■■■□□ 2.29
RP9-201ENST00000297157 ADD1P35611 737 aaKnown RBP29.35■■■□□ 2.29
RP9-201ENST00000297157 ARNTL2Q8WYA1 636 aa29.35■■■□□ 2.29
RP9-201ENST00000297157 CCDC196A0A1B0GTZ2 297 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 hCG_1642624A0A1W2PR95 340 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 TLL1O43897 1013 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 EIF5BO60841 1220 aaKnown RBP29.34■■■□□ 2.29
RP9-201ENST00000297157 PPFIA4O75335 1185 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 BMP1P13497 986 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 PDIA3P30101 505 aaKnown RBP29.34■■■□□ 2.29
RP9-201ENST00000297157 METAP2P50579 478 aaKnown RBP eCLIP29.34■■■□□ 2.29
RP9-201ENST00000297157 FGD1P98174 961 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 NTRK3Q16288 839 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 TCTN1Q2MV58 587 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 HSDL1Q3SXM5 330 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 CELF3Q5SZQ8 465 aaKnown RBP29.34■■■□□ 2.29
RP9-201ENST00000297157 IL27Q8NEV9 243 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 WNT8BQ93098 351 aa29.34■■■□□ 2.29
RP9-201ENST00000297157 LPXNO60711 386 aa29.33■■■□□ 2.29
RP9-201ENST00000297157 SEC24BO95487 1268 aa29.33■■■□□ 2.29
RP9-201ENST00000297157 TGFB3P10600 412 aa29.33■■■□□ 2.29
RP9-201ENST00000297157 MYCLP12524 364 aaPredicted RBP29.33■■■□□ 2.29
RP9-201ENST00000297157 UBA1P22314 1058 aaKnown RBP29.33■■■□□ 2.29
RP9-201ENST00000297157 DEFB103AP81534 67 aa29.33■■■□□ 2.29
RP9-201ENST00000297157 TFF2Q03403 129 aa29.33■■■□□ 2.29
RP9-201ENST00000297157 TYW1BQ6NUM6 668 aa29.33■■■□□ 2.29
RP9-201ENST00000297157 SPRED2Q7Z698 418 aa29.33■■■□□ 2.29
RP9-201ENST00000297157 V9GY48 417 aaPredicted RBP29.33■■■□□ 2.29
RP9-201ENST00000297157 ABHD14A-ACY1A0A1B0GW23 586 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 LCHNA4D1U4 455 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 hCG_1984214I3L0E3 225 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 GGPS1O95749 300 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 SP2Q02086 613 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 HIC1Q14526 733 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 MBTPS1Q14703 1052 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 AAK1Q2M2I8 961 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 KRT40Q6A162 431 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 WWC2Q6AWC2 1192 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 ZNF713Q8N859 430 aaPredicted RBP29.32■■■□□ 2.28
RP9-201ENST00000297157 SPATA33Q96N06 139 aa29.32■■■□□ 2.28
RP9-201ENST00000297157 UPF3BQ9BZI7 483 aaKnown RBP29.32■■■□□ 2.28
RP9-201ENST00000297157 GRB10Q13322 594 aa29.31■■■□□ 2.28
RP9-201ENST00000297157 ZNF618Q5T7W0 954 aa29.31■■■□□ 2.28
RP9-201ENST00000297157 PPP1R18Q6NYC8 613 aa29.31■■■□□ 2.28
RP9-201ENST00000297157 USP17L6PQ6QN14 398 aa29.31■■■□□ 2.28
RP9-201ENST00000297157 TMCO2Q7Z6W1 182 aaPredicted RBP29.31■■■□□ 2.28
RP9-201ENST00000297157 ZNF274Q96GC6 653 aaPredicted RBP29.31■■■□□ 2.28
RP9-201ENST00000297157 C16orf70Q9BSU1 422 aa29.31■■■□□ 2.28
RP9-201ENST00000297157 PSTPIP2Q9H939 334 aa29.31■■■□□ 2.28
RP9-201ENST00000297157 TCF20Q9UGU0 1960 aaKnown RBP29.3■■■□□ 2.28
RP9-201ENST00000297157 EFCAB14O75071 495 aa29.3■■■□□ 2.28
RP9-201ENST00000297157 GJB5O95377 273 aa29.3■■■□□ 2.28
RP9-201ENST00000297157 CCND2P30279 289 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms