RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ALX1Q15699 326 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 C12orf60Q5U649 245 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 PARK7Q99497 189 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 FAM204AQ9H8W3 233 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 WDR44Q5JSH3 913 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 CEP120Q8N960 986 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 GDAP1L1Q96MZ0 367 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 DDX4Q9NQI0 724 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 CDC23Q9UJX2 597 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 PASKQ96RG2 1323 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 VGLL4Q14135 290 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 KRT25Q7Z3Z0 450 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 USP28Q96RU2 1077 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 KLHL14Q9P2G3 628 aa12.98□□□□□ -0.33
SYNGAP1-201ENST00000293748 TCRBV5S4A2TA0A5A2 114 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 RASSF10A6NK89 507 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 USP2O75604 605 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 HSPD1P10809 573 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 DNM2P50570 870 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 SRGAP1Q7Z6B7 1085 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 EFCAB13Q8IY85 973 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 GBP5Q96PP8 586 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 BCAP29Q9UHQ4 241 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 KRT15P19012 456 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 STX2P32856 288 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 KIF23Q02241 960 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 CCDC105Q8IYK2 499 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 ZKSCAN4Q969J2 545 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 DESI2Q9BSY9 194 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 NUF2Q9BZD4 464 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 ZBTB21Q9ULJ3 1066 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 COL4A1P02462 1669 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 I3L4J1 428 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 CCNA1P78396 465 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 IRX4P78413 519 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 SPP2Q13103 211 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 AKNAD1Q5T1N1 836 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 SPRYD7Q5W111 196 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 ADGRA1Q86SQ6 560 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 LRWD1Q9UFC0 647 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 SERTAD1Q9UHV2 236 aa12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 RRP15Q9Y3B9 282 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-201ENST00000293748 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 GSG1L2A8MUP6 293 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 LUC7L3O95232 432 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 TROVE2P10155 538 aaKnown RBP eCLIP12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 PNOCQ13519 176 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 SH2D4BQ5SQS7 431 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 TBC1D31Q96DN5 1066 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 PDE11AQ9HCR9 933 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 MYO1AQ9UBC5 1043 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 AGTPBP1Q9UPW5 1226 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 FAM196BA6NMK8 535 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 TFAP4Q01664 338 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 MAP3K21Q5TCX8 1036 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 RRAGAQ7L523 313 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 CCDC170Q8IYT3 715 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 SALL3Q9BXA9 1300 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 A0A1W2PQ27 194 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 A0A1W2PQ64 194 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 A0A1W2PQD8 194 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 HGSO14964 777 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 MAP7Q14244 749 aa12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 ZYXQ15942 572 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 HERC4Q5GLZ8 1057 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-201ENST00000293748 ATRNL1Q5VV63 1379 aa12.96□□□□□ -0.34
SYNGAP1-201ENST00000293748 PKP1Q13835 747 aa12.96□□□□□ -0.34
SYNGAP1-201ENST00000293748 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.34
SYNGAP1-201ENST00000293748 MOB2Q70IA6 237 aa12.96□□□□□ -0.34
SYNGAP1-201ENST00000293748 P3H4Q92791 437 aa12.96□□□□□ -0.34
SYNGAP1-201ENST00000293748 EXOC4Q96A65 974 aa12.96□□□□□ -0.34
SYNGAP1-201ENST00000293748 AMFRQ9UKV5 643 aa12.96□□□□□ -0.34
SYNGAP1-201ENST00000293748 CCDC151A5D8V7 595 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 GNA14O95837 355 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 SLC10A3P09131 477 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 HOXD10P28358 340 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 NOL9Q5SY16 702 aaKnown RBP12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 FNBP1Q96RU3 617 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 PNMA2Q9UL42 364 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 A0A087WUV0 522 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 PFKFB2O60825 505 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 FGAP02671 866 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 KRT5P13647 590 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 RFC1P35251 1148 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 MUM1Q2TAK8 710 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 C16orf86Q6ZW13 317 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 BANK1Q8NDB2 785 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 PHKBQ93100 1093 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 FAM114A2Q9NRY5 505 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 KCNJ18B7U540 433 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 E7EWF7 191 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 PRDM1O75626 825 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 TXKP42681 527 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 BIRC3Q13489 604 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms