RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 CDHR1Q96JP9 859 aa19.97■□□□□ 0.79
TFF3-201ENST00000291525 ZBED2Q9BTP6 218 aa19.97■□□□□ 0.79
TFF3-201ENST00000291525 RTEL1Q9NZ71 1219 aa19.97■□□□□ 0.79
TFF3-201ENST00000291525 PTPRSQ13332 1948 aa19.97■□□□□ 0.79
TFF3-201ENST00000291525 CHD9Q3L8U1 2897 aa19.97■□□□□ 0.79
TFF3-201ENST00000291525 CENPQQ7L2Z9 268 aaPredicted RBP19.96■□□□□ 0.79
TFF3-201ENST00000291525 CYFIP1Q7L576 1253 aa19.96■□□□□ 0.79
TFF3-201ENST00000291525 SERINC5Q86VE9 423 aa19.96■□□□□ 0.79
TFF3-201ENST00000291525 MICALL1Q8N3F8 863 aa19.96■□□□□ 0.79
TFF3-201ENST00000291525 SENP7Q9BQF6 1050 aa19.96■□□□□ 0.79
TFF3-201ENST00000291525 PSTPIP2Q9H939 334 aa19.96■□□□□ 0.79
TFF3-201ENST00000291525 MEIS2O14770 477 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 CAND2O75155 1236 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 SMIM10L2AP0DMW4 78 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 SMIM10L2BP0DMW5 78 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 THPOP40225 353 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 MRPS5P82675 430 aaKnown RBP19.95■□□□□ 0.78
TFF3-201ENST00000291525 ZNF200P98182 395 aaPredicted RBP19.95■□□□□ 0.78
TFF3-201ENST00000291525 TAP1Q03518 808 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 GPNMBQ14956 572 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 GPR20Q99678 358 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 EHMT1Q9H9B1 1298 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 PRDM6Q9NQX0 595 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 KAT6AQ92794 2004 aa19.95■□□□□ 0.78
TFF3-201ENST00000291525 RSPH10B2B2RC85 870 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 LGR5O75473 907 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 RSPH10BP0C881 870 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 RXRAP19793 462 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 POU3F3P20264 500 aaPredicted RBP19.94■□□□□ 0.78
TFF3-201ENST00000291525 SEMA3FQ13275 785 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 TMTC3Q6ZXV5 915 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 SGMS1Q86VZ5 419 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 MICU3Q86XE3 530 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 FANCBQ8NB91 859 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 ARNTL2Q8WYA1 636 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 GPRASP2Q96D09 838 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 CERS4Q9HA82 394 aa19.94■□□□□ 0.78
TFF3-201ENST00000291525 RBM28Q9NW13 759 aaKnown RBP19.94■□□□□ 0.78
TFF3-201ENST00000291525 SPDYE3A6NKU9 549 aa19.93■□□□□ 0.78
TFF3-201ENST00000291525 HOXC8P31273 242 aa19.93■□□□□ 0.78
TFF3-201ENST00000291525 TRAF7Q6Q0C0 670 aa19.93■□□□□ 0.78
TFF3-201ENST00000291525 CMTR1Q8N1G2 835 aaKnown RBP19.93■□□□□ 0.78
TFF3-201ENST00000291525 WNT8BQ93098 351 aa19.93■□□□□ 0.78
TFF3-201ENST00000291525 ASB2Q96Q27 587 aa19.93■□□□□ 0.78
TFF3-201ENST00000291525 LRRC2Q9BYS8 371 aa19.93■□□□□ 0.78
TFF3-201ENST00000291525 MICAL3Q7RTP6 2002 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 GJB5O95377 273 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 DEFB103AP81534 67 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 HIC1Q14526 733 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 SKIV2LQ15477 1246 aaKnown RBP19.92■□□□□ 0.78
TFF3-201ENST00000291525 AAK1Q2M2I8 961 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 UTP14CQ5TAP6 766 aaKnown RBP19.92■□□□□ 0.78
TFF3-201ENST00000291525 HEATR3Q7Z4Q2 680 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 NEK1Q96PY6 1258 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 RAD9AQ99638 391 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 RNPEPQ9H4A4 650 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 BCAS3Q9H6U6 928 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 MTCH2Q9Y6C9 303 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 CHD7Q9P2D1 2997 aa19.92■□□□□ 0.78
TFF3-201ENST00000291525 TREHO43280 583 aa19.91■□□□□ 0.78
TFF3-201ENST00000291525 AMHP03971 560 aa19.91■□□□□ 0.78
TFF3-201ENST00000291525 SP4Q02446 784 aa19.91■□□□□ 0.78
TFF3-201ENST00000291525 KRT32Q14532 448 aa19.91■□□□□ 0.78
TFF3-201ENST00000291525 RAB11FIP4Q86YS3 637 aa19.91■□□□□ 0.78
TFF3-201ENST00000291525 TEX2Q8IWB9 1127 aa19.91■□□□□ 0.78
TFF3-201ENST00000291525 CCDC82Q8N4S0 544 aa19.91■□□□□ 0.78
TFF3-201ENST00000291525 RFXAPO00287 272 aa19.9■□□□□ 0.78
TFF3-201ENST00000291525 MBTPS1Q14703 1052 aa19.9■□□□□ 0.78
TFF3-201ENST00000291525 APOA5Q6Q788 366 aa19.9■□□□□ 0.78
TFF3-201ENST00000291525 TRIM50Q86XT4 487 aa19.9■□□□□ 0.78
TFF3-201ENST00000291525 SEPT8Q92599 483 aa19.9■□□□□ 0.78
TFF3-201ENST00000291525 COL4A4P53420 1690 aaPredicted RBP19.9■□□□□ 0.78
TFF3-201ENST00000291525 EPOPA6NHQ4 379 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 hCG_1984214I3L0E3 225 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 TNFRSF10AO00220 468 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 MAFGO15525 162 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 CDC45O75419 566 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 ARHGEF15O94989 841 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 TCF7P36402 384 aaPredicted RBP19.89■□□□□ 0.77
TFF3-201ENST00000291525 ARHGAP4P98171 946 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 MTMR1Q13613 665 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 UBE2SQ16763 222 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 RTN1Q16799 776 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 PLEKHG4Q58EX7 1191 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 PRRC2BQ5JSZ5 2229 aaKnown RBP19.89■□□□□ 0.77
TFF3-201ENST00000291525 PPP1R18Q6NYC8 613 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 DHX32Q7L7V1 743 aaKnown RBP19.89■□□□□ 0.77
TFF3-201ENST00000291525 ZNF713Q8N859 430 aaPredicted RBP19.89■□□□□ 0.77
TFF3-201ENST00000291525 DBF4BQ8NFT6 615 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 NRCAMQ92823 1304 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 SETD4Q9NVD3 440 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 PCDHA6Q9UN73 950 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 INSL6Q9Y581 213 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 PCDHA8Q9Y5H6 950 aa19.89■□□□□ 0.77
TFF3-201ENST00000291525 SIP14410 1827 aa19.88■□□□□ 0.77
TFF3-201ENST00000291525 CNTNAP5Q8WYK1 1306 aa19.88■□□□□ 0.77
TFF3-201ENST00000291525 hCG_1642624A0A1W2PR95 340 aa19.88■□□□□ 0.77
TFF3-201ENST00000291525 ZBTB43O43298 467 aa19.88■□□□□ 0.77
TFF3-201ENST00000291525 HMGB1P09429 215 aaKnown RBP19.88■□□□□ 0.77
TFF3-201ENST00000291525 CTSHP09668 335 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms