RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 HERVK_113P62684 666 aa11.04□□□□□ -0.64
HMGCR-201ENST00000287936 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
HMGCR-201ENST00000287936 LRRC45Q96CN5 670 aa11.04□□□□□ -0.64
HMGCR-201ENST00000287936 FAM20AQ96MK3 541 aa11.04□□□□□ -0.64
HMGCR-201ENST00000287936 NAP1L3Q99457 506 aaPredicted RBP11.04□□□□□ -0.64
HMGCR-201ENST00000287936 ATP6V0A2Q9Y487 856 aa11.04□□□□□ -0.64
HMGCR-201ENST00000287936 BAZ2BQ9UIF8 2168 aaKnown RBP11.03□□□□□ -0.64
HMGCR-201ENST00000287936 ARHGEF35A5YM69 484 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 CHMP2AO43633 222 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 CEP104O60308 925 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 BMP3P12645 472 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 GJD4Q96KN9 370 aaPredicted RBP11.03□□□□□ -0.64
HMGCR-201ENST00000287936 ANKZF1Q9H8Y5 726 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 MLXIPQ9HAP2 919 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 ZCCHC17Q9NP64 241 aaKnown RBP11.03□□□□□ -0.64
HMGCR-201ENST00000287936 RASAL2Q9UJF2 1139 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 SAMM50Q9Y512 469 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 CACNB1Q02641 598 aaPredicted RBP11.03□□□□□ -0.64
HMGCR-201ENST00000287936 COBLL1Q53SF7 1204 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 EMBQ6PCB8 327 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 PEX26Q7Z412 305 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 CTNNBL1Q8WYA6 563 aaPredicted RBP11.03□□□□□ -0.64
HMGCR-201ENST00000287936 OSBPL9Q96SU4 736 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 PNKPQ96T60 521 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 MTRQ99707 1265 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 PODXL2Q9NZ53 605 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 GAS7O60861 476 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 CFBP00751 764 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 H2AFZP0C0S5 128 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 FERP16591 822 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 TNFAIP3P21580 790 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 STAT1P42224 750 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 CLUL1Q15846 466 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 ZNF662Q6ZS27 426 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 H2AFVQ71UI9 128 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 USP37Q86T82 979 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 NOA1Q8NC60 698 aaKnown RBP11.03□□□□□ -0.64
HMGCR-201ENST00000287936 TAOK3Q9H2K8 898 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 MRPL11Q9Y3B7 192 aaKnown RBP11.03□□□□□ -0.64
HMGCR-201ENST00000287936 PCDHB13Q9Y5F0 798 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 GAKO14976 1311 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 SPATA31A6Q5VVP1 1343 aa11.03□□□□□ -0.64
HMGCR-201ENST00000287936 POTEB3A0JP26 581 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 POTECB2RU33 542 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L15C9J2P7 530 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L13C9JLJ4 530 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L11C9JVI0 530 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L18D6R9N7 530 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L22D6RA61 530 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L17D6RBQ6 530 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L19D6RCP7 530 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L20D6RJB6 530 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 GCOM1H8Y6P7 765 aaPredicted RBP11.02□□□□□ -0.64
HMGCR-201ENST00000287936 POLR2MP0CAP2 368 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP8P40818 1118 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 KLK7P49862 253 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 ARHGAP4P98171 946 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L24Q0WX57 530 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 USP17L6PQ6QN14 398 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 POTEBQ6S5H4 581 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 TPH2Q8IWU9 490 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 SEMA6BQ9H3T3 888 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 SLC37A4O43826 429 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 ZMYND10O75800 440 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 HNRNPH2P55795 449 aaKnown RBP11.02□□□□□ -0.64
HMGCR-201ENST00000287936 TTBK2Q6IQ55 1244 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 FAM133AQ8N9E0 248 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 SYN2Q92777 582 aaPredicted RBP11.02□□□□□ -0.64
HMGCR-201ENST00000287936 SHISA4Q96DD7 197 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 MASTLQ96GX5 879 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 NYAP2Q9P242 653 aa11.02□□□□□ -0.64
HMGCR-201ENST00000287936 TBX3O15119 743 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 EEF2P13639 858 aaKnown RBP11.02□□□□□ -0.65
HMGCR-201ENST00000287936 KRT26Q7Z3Y9 468 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 RASSF4Q9H2L5 321 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.02□□□□□ -0.651e-9■■■□□ 16.1
HMGCR-201ENST00000287936 STIM2Q9P246 746 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 L1RE1Q9UN81 338 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 CHD4Q14839 1912 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 KCNK3O14649 394 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 TM4SF1P30408 202 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 ALS2CLQ60I27 953 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 KLHL7Q8IXQ5 586 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 CERKQ8TCT0 537 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 COG1Q8WTW3 980 aa11.02□□□□□ -0.65
HMGCR-201ENST00000287936 ARAP2Q8WZ64 1704 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 ROBO1Q9Y6N7 1651 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 PITPNM2Q9BZ72 1349 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 CYP4A11Q02928 519 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 GFPT1Q06210 699 aaPredicted RBP11.01□□□□□ -0.65
HMGCR-201ENST00000287936 EHHADHQ08426 723 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 EDRF1Q3B7T1 1238 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 DNAJC21Q5F1R6 531 aaKnown RBP11.01□□□□□ -0.65
HMGCR-201ENST00000287936 KIAA0895Q8NCT3 520 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 PBKQ96KB5 322 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 DBNDD1Q9H9R9 158 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 POLLQ9UGP5 575 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 ABCA3Q99758 1704 aa11.01□□□□□ -0.65
HMGCR-201ENST00000287936 MTMR9Q96QG7 549 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms